Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01331 ATGGATTCCATGAAAGAAGAAAAAAGGAATTTAGATTCTCAACTATGGCATGCTTGTGCTGGTGGAATGGTTAAAATTCCATCCATTGATTCTAAAGTCTTTTATTTTCCTCAAGGCCACGCAGAACAGGCTAATGGGGACCTGGACCTTGGAAGTCCTAGAATTTCCTCTCTCATTCTCTGCAGAGTTTCTGCGGTTCGATTCATGGCGGATTCAGAAACGGACGAGGTGTTTGCTGAGATGACTTTGATTCCTTTGAGAAGCAATGATTTTGATCGTGAAGAAGATGATTGGACTGGGGGAAGTAATCAGAGTGAGAGCGAAGAAAATCATACTCCCTTTGCTAAAACTTTGACTCAATCCGACGCCAACAATGGCGGTGGATTCTCCGTTCCTCGCTATTGCGCAGAAACAATTTTTCCGCCTTTGGACTACTCAGCGAATCCACCCGTTCAGACAATTCACGCGACGGATGTTCACGGCCAGATTTGGAAGTTTAGGCATATTTATCGGGGGACTCCTCGCCGCCACCTTTTGACGACTGGATGGAGTAATTTAGTAAATTGCAAGAAGCTTGTGGCCGGAGATTCAATCGTGTTCTTGAAATCGGAGAATGGAGAGCTTCAGATCGGAATAAGGAGGGCAAAAAGGGGAATAGGAGGGCGATTTGATTTCTCAATTCCACCATTGGCGAGAAATTCAAATGGCGATCTGAGAGGAAAAGTGAGTGCTGAATCGATAATCAAAGCGGTAAATCTTGCTTCGAGTGGGCAGGCTTTTGCAGTGAAGTATTTTCCGAGCTCAAACACACCTGAATTTTTTGTCAAGGCCTCCGCCGTGAGAGCTGCAATGCAAGTTCGATGGTCGATCGGAATGAGATTCAAGATGGCTTTCGAAACAGAGGATTCCGCTAGAATTAGTTGGTTTATGGGAACTATATCTTCCATCCAACCGGCCGATCCCATCCGGTGGCCTAATTCTCCCTGGAGACTTCTGCAGGTAACGTGGGATGAGCCGGATTTTTTACAGAATGTGAAGTTTGTGAACCCATGGTCAGTTGAGGCGGTGACAAACATCATACCTTATCACGTCTCACCCTTTGCACCACCAAGAAAGAAACAAAGGCTTCAGTCCAACTCGGATTTAAATCCGAGAATGCTAGACGATAATCGTGCAGGCATACAGGGAGCCAGGCATGTTGAATCACTGAATCCTCCATTAAAGGAGCCGAATGTTGAAAATCCAACAAATATTTTTAAGGAAAACGAGATGAAAACACCACGCATCTTATTGTTTGGTCAAGTGATTCTTCCTGGCCAGAGAGTTTCCAAGGGTGACCCTAAAGACACTACCGGAAATAGTTCATCGGAGAAGACAGATGCTTCCTCCGGTGTTGCTACGTCACCACATTGGAATAGTTCGCCGGAAAACTTATCTGATGCAGGGTTTGTATGGTGCAAAGATCACCAGAAAACTGTGCTCGACAGTGGCCACCGGGAGGAATTAGTGGATCAATTGTTCTTCATGCGACATTATTTCCCAATCCCGTAA 1551 45.33 MDSMKEEKRNLDSQLWHACAGGMVKIPSIDSKVFYFPQGHAEQANGDLDLGSPRISSLILCRVSAVRFMADSETDEVFAEMTLIPLRSNDFDREEDDWTGGSNQSESEENHTPFAKTLTQSDANNGGGFSVPRYCAETIFPPLDYSANPPVQTIHATDVHGQIWKFRHIYRGTPRRHLLTTGWSNLVNCKKLVAGDSIVFLKSENGELQIGIRRAKRGIGGRFDFSIPPLARNSNGDLRGKVSAESIIKAVNLASSGQAFAVKYFPSSNTPEFFVKASAVRAAMQVRWSIGMRFKMAFETEDSARISWFMGTISSIQPADPIRWPNSPWRLLQVTWDEPDFLQNVKFVNPWSVEAVTNIIPYHVSPFAPPRKKQRLQSNSDLNPRMLDDNRAGIQGARHVESLNPPLKEPNVENPTNIFKENEMKTPRILLFGQVILPGQRVSKGDPKDTTGNSSSEKTDASSGVATSPHWNSSPENLSDAGFVWCKDHQKTVLDSGHREELVDQLFFMRHYFPIP 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 21462163 21463796 - Bpe002232.1 Bpe15g01331 117010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01331 516 PANTHER AUXIN RESPONSE FACTOR 16 5 399 - -
Bpe15g01331 516 Gene3D - 112 216 IPR015300 -
Bpe15g01331 516 MobiDBLite consensus disorder prediction 446 474 - -
Bpe15g01331 516 MobiDBLite consensus disorder prediction 92 111 - -
Bpe15g01331 516 CDD B3_DNA 114 214 IPR003340 GO:0003677
Bpe15g01331 516 SUPERFAMILY DNA-binding pseudobarrel domain 107 217 IPR015300 -
Bpe15g01331 516 Pfam B3 DNA binding domain 114 215 IPR003340 GO:0003677
Bpe15g01331 516 Gene3D - 287 360 - -
Bpe15g01331 516 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 399 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe15g01331 516 SMART B3_2 114 216 IPR003340 GO:0003677
Bpe15g01331 516 ProSiteProfiles B3 DNA-binding domain profile. 114 216 IPR003340 GO:0003677
Bpe15g01331 516 MobiDBLite consensus disorder prediction 440 474 - -
Bpe15g01331 516 Pfam Auxin response factor 250 333 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01672 Bpe15g01331 CCT
Bpe04g01672 Bpe15g01331 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01331 Bpe-Chr15:21462163 Bpe01g00841 Bpe-Chr1:15864973 8.84E-86 dispersed
Bpe15g01331 Bpe-Chr15:21462163 Bpe02g00791 Bpe-Chr2:5743427 5.70E-174 wgd
Bpe15g01331 Bpe-Chr15:21462163 Bpe04g01672 Bpe-Chr4:22750640 0 wgd
Bpe15g01331 Bpe-Chr15:21462163 Bpe04g00699 Bpe-Chr4:4494819 6.57E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22677 PF02362 B3 6.30E-19 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01331 - - gab:108489534 572.392