Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01399 ATGTCTCACAAGATTCAAACCCGCCCTTCTCTTCATTCGATAAAATCATTGCCGGCTAATTATCGAGCTCTGGGTTACCAAGTCTCTAATAGCTTCAAAGAATCCCGAGGTTTGAATGTTGCAAGTGGGAAAATAGGCTCCTTAACTATTCCTGAAAATGGTGCATTACCGGATGGAACTGTTGAGAGATTTCAGAACAATGATGATGACTCACCATATTCCGAGAGCGTGATATCAGTCCAAGAAAGGCCTGCTTTAGGTGACAGAGACGTTGGCTCTATCGCATTGCCTTCGCGGCCAACTGTTGCATCACATGGTCAATACAAGTGGGATGACACTTCCTCCTACACGACCAAAAAGGTACTTCAATCTTGGTTTCAACTCCCGGATGGTAAGTGGGAGCTGATAAAGCTATTGTCTGTATCAGGAACTGAATCTGTCATTTTACTGCCTGATGGGAAAGTCTTAAAAATTATGCCTGAGAGTTTGATGCCGGCAAATCCAGATATTCTTGATGGTATAGATGATCTGATGCAACTTAGTTATCTAAACGAACCATCAGTTCTATACAATCTTCAATGCAGATACAATCAAGATATGATCTATACTAAAGCTGGGCCAGTGCTGGTTGCAATCAATCCCTTTAAAAAAGTTGATTTATATGGAAATGATTACATTGATGCGTACAAGACTAAATCCATTGAGAGTCCGCACGTGTATGCCATTACTGATACAGCTATACGTGAAATGATACGAGGTAGCTTGTGTTTCTTTCCATTTTTGATTGGTGAAAGTGGAGCAGGAAAAACTGAAACTGCAAAAATAGCAATGCAATATTTGGCTGCCATTGGTGGTGGAAGTGGAATTGAATATGAAGTTTTGAAGACGAATCCAATTTTAGAAGCCTTTGGCAATGCAAAAACATTGAGAAATGACAACTCCAGTCGCTTTGGAAAATTGATTGAAATTCACTTCAGTGAAACTGGAAAAATATCTGGTGCGAACATTCAGACGGTTGTTCAATGCATGAAGAATGAAAGGTCATATCATATATTTTATCAGCTCTGTGCTGGAGCTCCTCCTGCTCTGAGAGAGATTCTAAATTTAAAGAGTGCTTACGAGTACAAATATCTGAGCCAGAGTGAATGTTATTCAATTGCTGGGGTCAATGATGCAGATCAATTCCGGATTGTTATGGAAGCTCTTGATATTGTTCACATCAGCAAGGATGACCAGCAGAGTGTGTTTGCTATGATTGCTGCTGTGTTATGGCTTGGAAATGTTACCTTTTTTGTGATAGACAATGAGAACCACGTTGAAACCGTAGCTGATGAAGGTTTATTCACTGCTGCTAAATTGATTGAATGTAACATTGAAGAGCTAAATCTAGCTTTATCTACTCGGAATATGAGAGTTGGGAATGATAATATTATCCAGAAGTTAACACTATCACAAGTAAGAGGGGATCTAAGAAATTCCATGCTTGTAGCCAAGATAAGTTGTTTGCAGGGATTCTTATATGTTATTCACTTGCAGGCAATTGACGCCAGAGATGCTTTGGCTAAGTCAATTTATGCATGTCTGTTTGAATGGCTTGTTGAACAAATCAACAAATCTCTTGTCGTAGGCAAACGCCGAACCGGCAGATCCATTAGTATTCTGGATATCTATGGCTTTGAATCGTTTGATCGTAATAGCTTTGAACAGTTCTGCATAAATTACGCCAATGAGCGACTCCAACAACATTTCAATCGTCATCTGTTCAAGCTAGAGCAAGAAGAATATATCCAAGATGGGATTGACTGGACAAAAGTTGATTTTGATGACAACCAAGATTGTCTTAGCCTATTTGAAAAGAAACCCTTGGGTTTATTGTCCCTGTTAGATGAAGAGTCCACTTTTCCAAATGGATCAGATTTGACCTTTGCTAACAAGCTGAAGGAGCATCTGAATTCTAATTCTTGCTTTAGAGGAGAACGAGGCAAAGCCTTTACTGTTTGTCATTATGCAGGGGAGGTTATGTACGACACAACTGGATTTTTGGAGAAAAACAGGGACTTATTGCACCTAAATTCCATTAAGCTTCTGTCCTCTTGTTCACTTGAACTTCCTCAAATATTTGCATCTAGCTTGCTTAATCAATCGGAGAAGCCAGTGGTTGGTCCTTTACATAAATCAGGTGGTGCTGACTCCCAGAAATTAAGTGTGGCAACTAAGTTTAAGGCCCAATTGTTTCAATTGATGCAACGACTTGAGAATACCACTCCACATTTCATACGGTGTATCAAGCCAAACAACCTTCAGTGTCCTGGATTGTACGAGCAAGGACTTGTACTGCAGCAATTGAGATGTTGCGGAGTCCTAGAAGTAGTTAGAATATCGCGATCTGGTTTCCCTACCAGGATGTCGCACGAAAAGTTTGCTAGAAGGTATGGTTTTCTTCTACTGGAGAGCGTTACATCTCAGGATCCGCTAACTGTTTCTGTTGCAATTCTTCATCAGTTTAATATATTACCTGAAATGTACCAAGTTGGGTATACAAAACTGTTTTTCCGAACTGGACAGATTGGAGTGCTTGAAGATACCAGAAATCGCACCTTACACGGTGTCTTACGTGTTCAAAGCTGCTTCAGAGGATACCAAGCTCGTCGAAACCACAAGGAACTTAGAAGAGGAATTATCACTCTTCAATCATTTATACGTGGAGAGAAAACCAGAGAAGAATTTTCAGTCTTCTTACAGACACATAGAGCGGCAGTGATGATTCAGAAGAGAATTAGAGGCTGGATTATTAGAAACCAATTAAAGAAAAAAATTGATGCATCTGTCATAATTCAATCAGTTATTCGTGGTTGGCTGGTTAGACAGTGCTCAGGAAATATAGGATTAATGACACGTGGGGGTATTAAGGCAAATGAGTCAGACGAGGTGCTCGTGAAGTCGTCATTCCTTGCAGATTTACAGCGTCGTGTCCTCAAGTCTGAGGCAGCCTTTAGAGAGAAAGAAGAAGAGAATGACATTCTCCAACAACGTCTGCAACAATATGAAAATAGGTGGTTGGAGTATGAACTAAAAATGAAGTCAATGGAGGAGGTGTGGCAGAAACAAATGAGATCCCTACAATCCAGTCTTTCCATTGCAAAGAAGAGCTTAGCCCTTGATGATTCCGAGAGGAACTCTGATGCGTCTGTAAATGCAAGTGATGAAAGAGACTATACGTGGGAAACAGGAAGTAATAAGGGACAGGAAAGCAATGGGGTGAGACCTATGAGTGCAGGTTTGAGCGTTATAAGCCGGTTGGCAGAGGAATTTGAGCAAAGGAGTCAAGTGTTTGGCGATGATGCCAAATTCTTGGTGGAAGTGAAATCAGGTCAAGTGGAAGCAAGCTTGGATCCAGATAGGGAGCTGAGGAGGTTAAAGCAGATGTTTGAAGGTTGGAAAAAGGATTATGGGGCGAGACTGCGGGAAACAAAGGTGATTTTAAACAAGCTTGGTAGTGAAAGTGCTGTTGATAGGGTGAAAAAGAAGTGGTGGGGAAGGAGGAACAGCTCAAGGTTTTCTTGA 3564 40.77 MSHKIQTRPSLHSIKSLPANYRALGYQVSNSFKESRGLNVASGKIGSLTIPENGALPDGTVERFQNNDDDSPYSESVISVQERPALGDRDVGSIALPSRPTVASHGQYKWDDTSSYTTKKVLQSWFQLPDGKWELIKLLSVSGTESVILLPDGKVLKIMPESLMPANPDILDGIDDLMQLSYLNEPSVLYNLQCRYNQDMIYTKAGPVLVAINPFKKVDLYGNDYIDAYKTKSIESPHVYAITDTAIREMIRGSLCFFPFLIGESGAGKTETAKIAMQYLAAIGGGSGIEYEVLKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTVVQCMKNERSYHIFYQLCAGAPPALREILNLKSAYEYKYLSQSECYSIAGVNDADQFRIVMEALDIVHISKDDQQSVFAMIAAVLWLGNVTFFVIDNENHVETVADEGLFTAAKLIECNIEELNLALSTRNMRVGNDNIIQKLTLSQVRGDLRNSMLVAKISCLQGFLYVIHLQAIDARDALAKSIYACLFEWLVEQINKSLVVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGSDLTFANKLKEHLNSNSCFRGERGKAFTVCHYAGEVMYDTTGFLEKNRDLLHLNSIKLLSSCSLELPQIFASSLLNQSEKPVVGPLHKSGGADSQKLSVATKFKAQLFQLMQRLENTTPHFIRCIKPNNLQCPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHEKFARRYGFLLLESVTSQDPLTVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGVLRVQSCFRGYQARRNHKELRRGIITLQSFIRGEKTREEFSVFLQTHRAAVMIQKRIRGWIIRNQLKKKIDASVIIQSVIRGWLVRQCSGNIGLMTRGGIKANESDEVLVKSSFLADLQRRVLKSEAAFREKEEENDILQQRLQQYENRWLEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLALDDSERNSDASVNASDERDYTWETGSNKGQESNGVRPMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEGWKKDYGARLRETKVILNKLGSESAVDRVKKKWWGRRNSSRFS 1187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 21882194 21896697 + Bpe002294.1 Bpe15g01399 117078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01399 1187 PANTHER MYOSIN 9 506 - -
Bpe15g01399 1187 PANTHER MYOSIN 511 1186 - -
Bpe15g01399 1187 Pfam Myosin head (motor domain) 175 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 Gene3D - 347 403 - -
Bpe15g01399 1187 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 506 - -
Bpe15g01399 1187 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 511 1186 - -
Bpe15g01399 1187 ProSiteProfiles IQ motif profile. 868 895 IPR000048 GO:0005515
Bpe15g01399 1187 Gene3D Kinesin motor domain 171 797 IPR036961 -
Bpe15g01399 1187 Gene3D - 798 865 - -
Bpe15g01399 1187 Coils Coil 984 1032 - -
Bpe15g01399 1187 Pfam IQ calmodulin-binding motif 940 956 IPR000048 GO:0005515
Bpe15g01399 1187 Pfam IQ calmodulin-binding motif 916 936 IPR000048 GO:0005515
Bpe15g01399 1187 Pfam IQ calmodulin-binding motif 890 909 IPR000048 GO:0005515
Bpe15g01399 1187 Pfam IQ calmodulin-binding motif 870 887 IPR000048 GO:0005515
Bpe15g01399 1187 Gene3D Myosin VI head, motor domain, U50 subdomain 404 539 - -
Bpe15g01399 1187 MobiDBLite consensus disorder prediction 51 75 - -
Bpe15g01399 1187 ProSiteProfiles Myosin motor domain profile. 172 864 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 CDD MYSc_Myo8 186 852 IPR036022 -
Bpe15g01399 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 910 IPR027417 -
Bpe15g01399 1187 MobiDBLite consensus disorder prediction 1057 1089 - -
Bpe15g01399 1187 MobiDBLite consensus disorder prediction 1066 1089 - -
Bpe15g01399 1187 SMART iq_5 888 910 IPR000048 GO:0005515
Bpe15g01399 1187 SMART iq_5 937 959 IPR000048 GO:0005515
Bpe15g01399 1187 SMART iq_5 865 887 IPR000048 GO:0005515
Bpe15g01399 1187 SMART iq_5 914 936 IPR000048 GO:0005515
Bpe15g01399 1187 ProSiteProfiles IQ motif profile. 889 918 IPR000048 GO:0005515
Bpe15g01399 1187 PRINTS Myosin heavy chain signature 550 578 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 PRINTS Myosin heavy chain signature 202 221 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 PRINTS Myosin heavy chain signature 603 631 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 PRINTS Myosin heavy chain signature 298 325 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 PRINTS Myosin heavy chain signature 256 281 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 ProSiteProfiles IQ motif profile. 915 942 IPR000048 GO:0005515
Bpe15g01399 1187 Gene3D - 562 754 - -
Bpe15g01399 1187 SMART MYSc_2a 166 865 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe15g01399 1187 Gene3D - 868 914 - -
Bpe15g01399 1187 Gene3D - 915 959 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00819 Bpe-Chr3:28148861 Bpe15g01399 Bpe-Chr15:21882194 0 dispersed
Bpe11g00503 Bpe-Chr11:3891843 Bpe15g01399 Bpe-Chr15:21882194 3.65E-59 dispersed
Bpe15g00951 Bpe-Chr15:19214991 Bpe15g01399 Bpe-Chr15:21882194 0 dispersed
Bpe15g01399 Bpe-Chr15:21882194 Bpe14g00281 Bpe-Chr14:2809984 0 dispersed
Bpe15g01399 Bpe-Chr15:21882194 Bpe08g01157 Bpe-Chr8:13348779 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01399 - K10357 zju:107421963 1800.41