Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g0118 | ATGGAAGAAGCTGCAGGTGGATCCGGATCAGGATTACCTGATCCATCTCAATTATTCGGAGTTTCCACACCGCCGCCGCCTTTAACCGTCGATGCCGCCATGAGTGATTCTCAGCAAGTCGAAGCTGCTTCTCCGATTAGTAGCCGACCTCCAGCAGTACCGTCTTCGTTAAATTATGAGGAACTCATTCGTCTCGGCGGCGGTGGCGGTGGTCAGATGGTGGTTGACGACGAAGAAACTGACCGTAGCGGCGGCGGAAGCGGTGGTAATCGGTGGCCGCGTCAGGAAACGCTTGCTTTGCTTAAAATTAGGTCAGAGATGGATTCCGCGTTTCGTGATGCTACACTTAAAGGACCTCTCTGGGATGAAGTCTCCAGGAAGTTAGGGGAAATGGGGTATAAGAGAAATGCAAAAAAATGCAAAGAGAAATTCGAGAATGTTCAAAAATATTACAAACGCACAAAAGAAGGAAGAGGAGGGCGTCAAGATGGCAAAACCTACAAATTCTTTACGCAACTTGAGGCTCTTCATAACGCAAACGTGGCGCCTTCTTCTTCATCTTCATTCACACTGCCACAGCCCACCACCGTTGGCTTTGGGATTAGCAACCCTACTCCAATCTCATCCGTTAAAATTTCCACATCTTCCTCACAAAACCCAATGGGAATCTTTTCTCCTCCACCAGATCATTTCACTGTCCGGCCGCCACCCACCGTCGCCGCTCCTATGGGTGTAAGCTTTTCGTCGAACACCTCATCTGCATCCACTGAAGACGATGATAACGATGAAGATGAAGAGATGGGGTTTGATGTTGACCTTGAAGGGTTGCCGGAGAATGTAGCGGGTAGTAGTCGGAAGCGGCGGAGAGGGGTGGTTAAAGGAAATGAGTCAAGAACTCATAAGATGATGATGGAGTTTTTCGAGGGTTTGATGAAACAGGTAATGGAGAAACAAGAAGTTATGCAACAGAAGTTTTTGGAAGCGATTGAAAAAAGAGAACAAGATAGGATGGTCAGAGAAGAGAATTGGAAAAGGCAAGAAATGGCTAGGTTGAGTCAAGAACAAGAAAGAATGGCTCAAGAACGGACAATTTCTGCTTCTAGAGATGCTGCCATTATTGCTTTTCTTCAGAAATTTACTGGCCAAACCATTCAATTTTCAGCCCCACAACAACAACAACAACAATTTGATTTGGCGCCTGTGCCTGTGGCTGTACCTGTATCCGTAGCTGTGTCTGTACCTATGCCTATGCCTGTGCCAGCGCCACTATCTCCTGTCCCCTCTCAGCCATTGCAACCACAAACTCTGCCACAGCCGCCTTCAAATACAATCCCATTGGATCAACCAATGTTTCAGGAAATTAGCCAAGGAGGAGGAGATGGATCTTCAGAACCCATTTCTTCAAGATGGCCAAAACAGGAAGTTTTAGCTTTAATAAAACTGAGAGGTGGGCTTGAATCCAGGTATCAAGAAACAGGTCCAAAGGGTCCTCTGTGGGAAGAGATTTCAGCTGGAATGGCACGGATGGGTTACAAGAGAAGTGCTAAAAGATGTAAAGAGAAATGGGAGAATATCAATAAGTATTTCAAGAAAGTTAAAGAAAGCAACAAAAAACGTCGTGAGGATTCTAAAACCTGCCCTTATTTCAATGAACTCGATGCTCTCTACCGCAAGAAAATCCTTTCTGCTTCTGCTTCTGATTCTGGTTCCTTTAGTGATACCAACAAATTTGAACAAAACCCAACAACAACGACAACAACAACAACAGATCTTCAACCTCAACCCCATTCTTCCATTCCTCAAGGTTTATCCGCTACTCTTTTTGGTGAAGGAACAGAAGAACAACCATCATCCACGAAGCCAGAAGACATTGTGAATGAGTTGATGGAGCTGCAGGACGACATCTACCAACGTCATCTCGATCAAGATGATGACGACGAAAACGACGATTATTGCAGTGATGATGATGATGATTTACCAGAAGAAAAGAGAAACAGTAACATTGATTATAAAATAGAGTTTCAAAGAAGAAACAATGTAGGAAACTCCAATGGCGTTGCGAGTGAGTTTCAATCAATGGCGGTGGTTCAATAG | 2094 | 44.89 | MEEAAGGSGSGLPDPSQLFGVSTPPPPLTVDAAMSDSQQVEAASPISSRPPAVPSSLNYEELIRLGGGGGGQMVVDDEETDRSGGGSGGNRWPRQETLALLKIRSEMDSAFRDATLKGPLWDEVSRKLGEMGYKRNAKKCKEKFENVQKYYKRTKEGRGGRQDGKTYKFFTQLEALHNANVAPSSSSSFTLPQPTTVGFGISNPTPISSVKISTSSSQNPMGIFSPPPDHFTVRPPPTVAAPMGVSFSSNTSSASTEDDDNDEDEEMGFDVDLEGLPENVAGSSRKRRRGVVKGNESRTHKMMMEFFEGLMKQVMEKQEVMQQKFLEAIEKREQDRMVREENWKRQEMARLSQEQERMAQERTISASRDAAIIAFLQKFTGQTIQFSAPQQQQQQFDLAPVPVAVPVSVAVSVPMPMPVPAPLSPVPSQPLQPQTLPQPPSNTIPLDQPMFQEISQGGGDGSSEPISSRWPKQEVLALIKLRGGLESRYQETGPKGPLWEEISAGMARMGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFNELDALYRKKILSASASDSGSFSDTNKFEQNPTTTTTTTTDLQPQPHSSIPQGLSATLFGEGTEEQPSSTKPEDIVNELMELQDDIYQRHLDQDDDDENDDYCSDDDDDLPEEKRNSNIDYKIEFQRRNNVGNSNGVASEFQSMAVVQ | 697 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1458956 | 1461277 | + | CaPI482276_01g001180.1 | Cam01g0118 | 117200 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 256 | 272 | - | - | |
Cam01g0118 | 697 | FunFam | Trihelix transcription factor GT-2 | 92 | 153 | - | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 32 | 54 | - | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 678 | 697 | - | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 643 | 657 | - | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 67 | 94 | - | - | |
Cam01g0118 | 697 | FunFam | Trihelix transcription factor GT-2 | 470 | 531 | - | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 565 | 604 | - | - | |
Cam01g0118 | 697 | CDD | GT1 | 468 | 533 | - | - | |
Cam01g0118 | 697 | CDD | GT1 | 90 | 155 | - | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 639 | 667 | - | - | |
Cam01g0118 | 697 | ProSiteProfiles | Myb-like domain profile. | 462 | 526 | IPR001005 | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 243 | 296 | - | - | |
Cam01g0118 | 697 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Cam01g0118 | 697 | Gene3D | - | 92 | 153 | - | - | |
Cam01g0118 | 697 | Gene3D | - | 470 | 531 | - | - | |
Cam01g0118 | 697 | Pfam | Myb/SANT-like DNA-binding domain | 468 | 555 | IPR044822 | - | |
Cam01g0118 | 697 | Pfam | Myb/SANT-like DNA-binding domain | 90 | 176 | IPR044822 | - | |
Cam01g0118 | 697 | PANTHER | FI21293P1 | 68 | 579 | - | - | |
Cam01g0118 | 697 | ProSiteProfiles | Myb-like domain profile. | 90 | 148 | IPR001005 | - | |
Cam01g0118 | 697 | SMART | sant | 88 | 150 | IPR001005 | - | |
Cam01g0118 | 697 | SMART | sant | 466 | 528 | IPR001005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0118 | Cam-Chr1:1458956 | Cam08g0789 | Cam-Chr8:9368873 | 1.60E-93 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51177 | PF13837 | Myb_DNA-bind_4 | 3.60E-23 | CL0123 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g0118 | - | - | - | 0.0 |