Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0191 ATGCCATTGCTCCCTCCCGCCGCCACGTCGTTGCCGGAAGTCTTCTCCCCCCCCCTCGCCGATAAGGGCCCTGTCATTCCGGTCACCAATCTCGTCAAGTTCCTTGAGCGTCTTCAAGTTGTGGCCCTCAACTCCTTCGGTAAATTGGATTTCGATCTTAAATACTACGTCGATTTGTCTCTGAAATTCGATTTGAATTCTACCCAAACCGCTTTCGATGCCCTTGAACGATCCTCCAATGGCTCTGTCTCCGTCGAGAATTTGAAGGCCTTCATTACTGACTATTTCGATAGTGCTGGAGCCGACTTGGTTTACTCTGAGCCGGTTGATTTTGTCCCTCAGCCTGTTGGGTTCTTGCCTAAAGTTGAGAATGTGGAGGTTAGAGCTTGGGCTTTGGATATTCATAATTTCTGGAAGAATCTTAGCCGTAGAGTCTCCGATGATCTCATTCATCGGCCGGATACCCACACTCTGCTGCCGTTGCCGGAGCCTGTTGTCGTTCCAGGAGCCAGATTCCGGGAAGTTTACTATTGGGATTCCTATTGGATTATCAGAGGTTTGCTAGCTAGTAAAATGTATGATACTGCAAAGGGAATTGTTATTAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTCTGAATGGTGCCAGATCTTACTACACCAACAGAAGTCAGCCTCCCCTTTTGAGTTCAATGGTTTATGACATATACCTTAGGACAGGGGATTTAGAGTTTGTGAGCAATGCACTCCCAGCCTTAATTAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCCATTACTGTCCGGGATGCTCCTGGTGGAAATGGAAATCACTCTTTATCTAGATACTATGCAATGTGGAACGAGCCGAGGCCAGAATCGTCACTGCTGGATGTGAAACTGGCCTCAAAGTTTGTTAATAACTATGAGAAACAACATCTATACCGGGAAATTGCATCGGCAGCCGAATCCGGTTGGGATTTCAGTACAAGATGGATGAGGGATCCAACAGACTTATCAACATTGGCTACCACTTCAATCCTGCCAGTTGATCTTAATGTATTCATACTCAAGATGGAACTGGACATTTCCAATTTGGCAAGAGCTGTTGGAGATTACTGCACGGCAGAACAATTCTTTGAGGCTTCTCTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATAATGGCTCATACAAGGGTGCTCATACATGGGATGCTCGAAACCAGAACCAAAACGTATATGCTTCGAACTTCATTCCGTTGTGGATCGAATCATTCTACTCCGATAAGAAACAAATGAAGAAAGTCTTGAAAAGTTTACGAAACTCAGGATTATTGTGCAATGCTGGGATTGCAACTTCAATGATTAATTCAGGAGAACAATGGGATTTCCCAAATGGTTGGGCGCCAATCCAACACATGATCGTCGAGGGACTGGCAAGGTCTGGATTGAAGGAAGCAAGGGCATTGGCCGAGGACATTGCTGCGAGATGGCTTCGAACCAACTATGTAGCTTACAAGCACACAGGATATATGCATGAGAAATACGATGTCCAAAAGTGTGGAGACTTTGGTGGTGGAGGTGAATATGTCCCTCAGACTGGTTTCGGATGGTCAAATGGAGTTGTTTTGGCATTCCTCGAAGAGTTTGGATGGCCGGAAGATCAAAAGATAGACTGCTACTTAACTTATTAA 1743 44.69 MPLLPPAATSLPEVFSPPLADKGPVIPVTNLVKFLERLQVVALNSFGKLDFDLKYYVDLSLKFDLNSTQTAFDALERSSNGSVSVENLKAFITDYFDSAGADLVYSEPVDFVPQPVGFLPKVENVEVRAWALDIHNFWKNLSRRVSDDLIHRPDTHTLLPLPEPVVVPGARFREVYYWDSYWIIRGLLASKMYDTAKGIVINLISMIDEFGHVLNGARSYYTNRSQPPLLSSMVYDIYLRTGDLEFVSNALPALIKEHKFWNSGFHSITVRDAPGGNGNHSLSRYYAMWNEPRPESSLLDVKLASKFVNNYEKQHLYREIASAAESGWDFSTRWMRDPTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDYCTAEQFFEASLVRKKTINSIFWNSEKGQWLDYWLDNGSYKGAHTWDARNQNQNVYASNFIPLWIESFYSDKKQMKKVLKSLRNSGLLCNAGIATSMINSGEQWDFPNGWAPIQHMIVEGLARSGLKEARALAEDIAARWLRTNYVAYKHTGYMHEKYDVQKCGDFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCYLTY 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2244863 2248260 - CaPI482276_01g001910.1 Cam01g0191 117273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0191 580 ProSitePatterns Trehalase signature 2. 477 486 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 Pfam Trehalase 49 567 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 PRINTS Glycosyl hydrolase family 37 signature 282 299 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 PRINTS Glycosyl hydrolase family 37 signature 210 228 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 PRINTS Glycosyl hydrolase family 37 signature 550 563 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 PRINTS Glycosyl hydrolase family 37 signature 349 366 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 PRINTS Glycosyl hydrolase family 37 signature 392 408 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 PRINTS Glycosyl hydrolase family 37 signature 470 486 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 PRINTS Glycosyl hydrolase family 37 signature 317 334 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cam01g0191 580 SUPERFAMILY Six-hairpin glycosidases 46 569 IPR008928 GO:0005975(InterPro)
Cam01g0191 580 PANTHER TREHALASE 35 576 IPR001661 GO:0004555(PANTHER)|GO:0004555(InterPro)|GO:0005991(InterPro)|GO:0005993(PANTHER)
Cam01g0191 580 Gene3D - 37 576 IPR012341 GO:0005975(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0189 Cam-Chr1:2239570 Cam01g0191 Cam-Chr1:2244863 6.20E-17 proximal
Cam01g0190 Cam-Chr1:2242329 Cam01g0191 Cam-Chr1:2244863 4.60E-26 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0191 K01194 - csv:101208719 1093.18