Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0240 ATGGCTACTAAAGAATCGAGTTCTACCACTCCCACTGAAGGCAAGATTAAAGGGGTTCTTACCCATGGTGGCCGATATGTGCAGTATAATGTTTATGGTAACTTGTTTGAGGTTTCGGCTAAGTATGTCCCTCCTTTGCGACCTATTGGTAGAGGTGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCAGAGACACATGAAGAGGTTGCCATCAAGAAAATTGGAAATGCATTTGATAACATAATCGATGCCAAGAGAACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATTATCGCTATCAGAGACATCATTAGGCCGCCAAAAAGAGAGGTTTTTAATGATGTGTATATTGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCTGACCAACCACTGACAGACGATCATTGCCAGTACTTTTTGTATCAGTTGTTGCGTGGGCTGAAATATGTACATTCAGCCAAGGTCCTGCACCGTGATCTCAAGCCAAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGAGACTTTGGATTGGCAAGGACGACTTCTGAAACTGACTTCATGACTGAATATGTGGTTACTCGCTGGTACCGAGCACCAGAGTTGCTCCTCAATTGTTCAGAGTACACTGCTGCTATCGATGTTTGGTCTGTGGGATGCATACTTGGTGAGATAATGACCAGAGAACCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTCAGACTTATAACTGAGCTACTAGGATCACCAGATGATGCAAGCCTAGGATTTCTCCGAAGTGATAATGCTCGAAGATACGTCAAGCAGCTTCCACAGTACAGGAAACAACAATTCTCAGCTAGATTTCCCAACGTGTCTCCAGCTGCCCTGGATCTTCTCGAAAAGATGCTCGTATTTGATCCGAACAAACGCATTACAGTGGAGGAGGCACTATGTCATCCATACTTGCAATCTCTTCACGACATCAATGACGAGCCGGTCTGTGCCAGGCCTTTCAATTTTGATTTTGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTCATTTGGAAAGAATCCGTCAGGTTCAATCCTGACGAATCCGCTAGGAGGACAACTCTTTGTGTTTGA 1152 42.97 MATKESSSTTPTEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQPLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSARFPNVSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCARPFNFDFEQPSCTEEHIKELIWKESVRFNPDESARRTTLCV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2714680 2718746 + CaPI482276_01g002400.1 Cam01g0240 117322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0240 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g0240 383 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Cam01g0240 383 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g0240 383 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Cam01g0240 383 FunFam Mitogen-activated protein kinase 127 356 - -
Cam01g0240 383 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g0240 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524(InterPro)
Cam01g0240 383 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Cam01g0240 383 CDD STKc_TEY_MAPK 36 372 - -
Cam01g0240 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 365 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam01g0240 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g0240 383 SMART serkin_6 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g0240 383 FunFam Mitogen-activated protein kinase 28 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0240 Cam-Chr1:2714680 Cam03g0213 Cam-Chr3:3112142 1.30E-169 dispersed
Cam07g0892 Cam-Chr7:22003091 Cam01g0240 Cam-Chr1:2714680 1.50E-117 transposed
Cam10g0105 Cam-Chr10:2630150 Cam01g0240 Cam-Chr1:2714680 2.20E-49 transposed
Cam01g0240 Cam-Chr1:2714680 Cam06g0350 Cam-Chr6:5607397 5.30E-184 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84849 PF00069 Pkinase 8.30E-71 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0240 K20600 - csv:101214254 778.859