Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0279 ATGGATGGGAGGGAAGGCATGGCATTGTCTGGTGGCTCTGCTTCTTATTACATACATAGGGGAGGAGGAGTTGGTGGCTCTGGATCAGGGCTGCCTACGGCTGGATCACATGCCTCCCCTGTATTCCGGCCGATGGCTAACCAGGGTGTTTTGTCTCACTCAAATCTCAGAGGCAACTCAGTTGGATCAACATATGCTGTTGAACCATCACATTCGAATTATCTTCGTGGGATGGGTATCAATGTCTCAGCTGGAGTGAACTCTAGTGAACCTGTAAAGAAGAAGAGAGGGAGACCCCGGAAATATGCCCCAGATGGGCAGGTCTCATTGGGTTTGTCTCCCATGTCTGCTGGTTCTAAGCTCACTCCGGGTTCGAATTCGTTAACCCCCAGACGACGACGAGGGCGGCCACCCGGTTCTGGAAGGAAACAACAATTAGCTCTCCTTGGTGATTGGATGAACAATTCAGCTGGACTAGCCTTTGCTCCACATGTTATTCACGTTGGAGCTGGAGAAGACATTGTAGCAAAAGTGTTGTCATTTGCACAGCAGAGGCCAAGGGCTCTTTGCATATTGTCTGGCAATGGGACTGTTTCTTCTGTAACACTACGTCAGCCTGCATCCACTGGCGTGAGCGTCACTTATGAGGGTCATTTCCAGATATTGTGCTTATCTGGTTCTTACTTGGTGGCTGAAGACGGTAGTCCTCGAAGTAGGACAGGAGGTATTAGTGTTTCTCTCTCTAGTCCTGATGGTCATGTCATTGGTGGCGGTGTTGCCGTTCTTATGGCAGCTGGCCCTGTTCAGGTAGTTGTATGTAGTTTTGTTTATGGTGCAAAGATAAAAAACAAGCAGGTGGCTGGTTCGAAAAGCAATGATGCTTCTGGAAATGAGCACCACGACAATTTGGTTTCGCCCACGAGTGCCCCATCTGCCCAAACCTACAATCCATCTCCAATTGGTGTTTGGCCTGGTTCCCGTTCAGTCGATATTCATGCTAACATATGGTATGAGACTTCATTTCAAGTTTCTCAAGTCAATGTTGATTTTATTGGGCAGAGTTTCTGGTTTTTGGAGGGGTATCTCATTCCAATTTCCTTTTCAAGGGCTTCTGCTCGAGATGAAAAGGATTATATGGTGGTGTTGGTTAGAAACAGAACTGGAATGGAATAG 1173 47.57 MDGREGMALSGGSASYYIHRGGGVGGSGSGLPTAGSHASPVFRPMANQGVLSHSNLRGNSVGSTYAVEPSHSNYLRGMGINVSAGVNSSEPVKKKRGRPRKYAPDGQVSLGLSPMSAGSKLTPGSNSLTPRRRRGRPPGSGRKQQLALLGDWMNNSAGLAFAPHVIHVGAGEDIVAKVLSFAQQRPRALCILSGNGTVSSVTLRQPASTGVSVTYEGHFQILCLSGSYLVAEDGSPRSRTGGISVSLSSPDGHVIGGGVAVLMAAGPVQVVVCSFVYGAKIKNKQVAGSKSNDASGNEHHDNLVSPTSAPSAQTYNPSPIGVWPGSRSVDIHANIWYETSFQVSQVNVDFIGQSFWFLEGYLIPISFSRASARDEKDYMVVLVRNRTGME 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3120353 3126542 + CaPI482276_01g002790.1 Cam01g0279 117361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0279 390 MobiDBLite consensus disorder prediction 85 143 - -
Cam01g0279 390 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 276 - -
Cam01g0279 390 Gene3D - 163 291 - -
Cam01g0279 390 ProSiteProfiles PPC domain profile profile. 158 299 IPR005175 -
Cam01g0279 390 MobiDBLite consensus disorder prediction 288 317 - -
Cam01g0279 390 CDD DUF296 163 275 IPR005175 -
Cam01g0279 390 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 305 IPR039605 GO:0003680(InterPro)
Cam01g0279 390 MobiDBLite consensus disorder prediction 112 129 - -
Cam01g0279 390 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0279 Cam-Chr1:3120353 Cam08g1372 Cam-Chr8:20042464 2.20E-52 dispersed
Cam01g0279 Cam-Chr1:3120353 Cam06g0384 Cam-Chr6:5941454 4.80E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0279 - - - 0.0