Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0355 ATGGAGGGAAGGGATGGTGGTGGCGCAAGTAGTGGGGTTACTGTGGTAGGATCAGATGCTCCGTCGGAGTACAAAATAGCTCCGAGGACCTCCGATAACCCACCGCAGACTGGTGGATCAACGCCGCCGCCGGCGACTCAATCAACTTCGACGCCGTCGGCTTCAGCTCAAGTAACTGCGCAGCCTCCGCCGCCTACGGCGGCCTCCTCAGTACCGGGAAAGAAGAAAAGAGGGAGACCCAGAAAATATGGACCCGATGGCTCTGTTTCTATGGCTCTGTCTCCCAAGCCGATATCGTCATCAGTGCCGCCGCCGGTGATCGACTTCTCGACGGAGAAGAAGGGGAAAGTACGGCCGGCGAGCGCTGTGAGTAAAAGCAAGTTCGAAGTGGATAATTTAGGCGACTGGGTTCCATGTTCTGTTGGTGGAAATTTTACACCTCATATCATCACTGTGAATGCAGGGGAGGATGTCACCATGAAGATTATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCGAACGGTGTGATCTCAAGTGTCACTCTTCGTCAGCCTGATTCATCTGGAGGAACACTAACTTATGAGGGACGCTTTGAAATACTTTCCTTGTCTGGCTCATTCATGCCTAGTGACAACGGAGGAACTAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTCGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCAAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCTGGAAATCAACACGAGCAGAAACCGAAAAAGCCAAAACATGATACTATTTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGCGTTGATCCTAAGTCCAACCTCTCACCTTCCAGTTCCTTTCGTGGCGATAACTGGTCAATGCTGCCAACTGATTCAAGGAATAAGTCAACTGATATCAATGTATCCCTACCCAGTGCTTGA 993 50.35 MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTPPPATQSTSTPSASAQVTAQPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPASAVSKSKFEVDNLGDWVPCSVGGNFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTISPAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3974678 3978315 + CaPI482276_01g003550.1 Cam01g0355 117437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0355 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 309 IPR039605 GO:0003680(InterPro)
Cam01g0355 330 MobiDBLite consensus disorder prediction 1 113 - -
Cam01g0355 330 MobiDBLite consensus disorder prediction 29 64 - -
Cam01g0355 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 144 265 - -
Cam01g0355 330 MobiDBLite consensus disorder prediction 264 330 - -
Cam01g0355 330 Gene3D - 147 276 - -
Cam01g0355 330 MobiDBLite consensus disorder prediction 294 330 - -
Cam01g0355 330 FunFam AT-hook motif nuclear-localized protein 1-like 147 278 - -
Cam01g0355 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 147 260 IPR005175 -
Cam01g0355 330 CDD DUF296 146 237 IPR005175 -
Cam01g0355 330 ProSiteProfiles PPC domain profile profile. 142 281 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0355 Cam-Chr1:3974678 Cam05g0256 Cam-Chr5:2510548 3.90E-90 dispersed
Cam01g0352 Cam-Chr1:3904616 Cam01g0355 Cam-Chr1:3974678 9.50E-19 proximal
Cam04g0996 Cam-Chr4:24115383 Cam01g0355 Cam-Chr1:3974678 1.50E-14 transposed
Cam11g0045 Cam-Chr11:2032285 Cam01g0355 Cam-Chr1:3974678 9.70E-104 transposed
Cam01g0355 Cam-Chr1:3974678 Cam05g0890 Cam-Chr5:8028536 1.50E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0355 - - - 0.0