Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0378 ATGGAACCCACTTCCAGATTCCTTCTAACTCTTACCCGCTTTCTTCTCACCTTCTTCGTCGGGTTTCTACCAATTCTTCTTTATGTCAAACGTTGGCGGCGGCGCTTGCGGCTGCCGCCAGGTCCTCGTGGCGTTCCGGTGCTGGGGAATCTGCCATTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCCGAAAGTACGGTCCAATTGTAAAGCTCCAATTGGGTGGAAAGATTGGTATAATCTTAAATTCACCAACGGTGGCGCGTGAGGTATTGAAGGACCACGATATCACATTCGCCAATCGTGACGTTCCTCAAGCAGGCCGAGTCGCCACGTACGGCGGTTTTGACATAACTTGGACCCCATATGGACCCGAGTGGCGGATGTTGAGAAAAGTTTGTACAATCAAGATGCTTAGCAATGCCAGTTTGGATTCTGTTTATGAGCTCCGTCGTAGAGAGGTGAGAAACACCGTGGGTCACTTGTACCGACGGGCGGGGGCGGCGGTCAACGTGGGAGAGCAAGGTTTTTTGACGGTTTTCAACGTGATTACGAGCATGTTGTGGGGTGGGACAGTGGAGGGGGACCAAAAGGACGCCTTTGCGGCTGAGTTTAGGGGGCTGGTTTCGGACATGACTGAGTTAGCGGGTAAGCCTAATATTTCTGACTTTTTTCCAAGTTTTGCACGCTTTGATCTCCAAGGAATCGAGAAGCAAGTGCTTAAGCTTGTCCCGAAATTGGACACCATTTTTGAAAAGATGATTGATGAACGATTGAGAATGATGGATGAAGAGGAGAGTAGGAATAAAAATGATTTCTTGCAGTTCTTACTTAAAGTCAAAGATGAAAGCGATTCCAAAACACCTCTCACCATGGTCCAACTTAAAGCCTTGCTAATGGATATGATAATAGGTGGAACAGACACATCATCAAACACCATTGAATTCGCAATGGCAGAGATGATGAAGAACCCAAAAATTGCAAAGAAAGCCATGGAAGAACTAGTAGCCGTGGTTGGTGAACAGAATATAGTTGAAGAATCCCATATACAGAGTTTGCCATATCTGAAAGCGGTAATGAAAGAAACCTTGCGTCTGCATCCAATTTTGCCGCTGCTAGTGCCGCACTGCCCCAGCCAGACCACCGTCATCTCCAATTACACAATCCCAAAGGGCTCTCGAGTGTTCGTCAACGTTTGGGCCATTCACCGAGACCCCAATTATTGGGAGAATCCATTGGAGTTCGACCCAGTGAGGTTCTTGAATGGTAAATTTGATTTCAGCGGGAGTGATTTTCGTTACATTCCATTTGGGTCCGGCAGAAGAAACTGTGCAGGGATAGCCATGGCGGAAAGAACAGTAATGTATTTGCTTTCCACACTTTTGCATTCCTTCGATTGGAAATTGAAGGAAGGTGAGAAGCTGGAAATTGAAGAGAAATTTGGGATTGTTTTAAAGATGAAGAAGCCTCTTCTTCTCATCCCAACACCTAGATTATCAGACTCCTCTTTGTATCAGTAA 1530 46.27 MEPTSRFLLTLTRFLLTFFVGFLPILLYVKRWRRRLRLPPGPRGVPVLGNLPFLDPELHTYFTELGRKYGPIVKLQLGGKIGIILNSPTVAREVLKDHDITFANRDVPQAGRVATYGGFDITWTPYGPEWRMLRKVCTIKMLSNASLDSVYELRRREVRNTVGHLYRRAGAAVNVGEQGFLTVFNVITSMLWGGTVEGDQKDAFAAEFRGLVSDMTELAGKPNISDFFPSFARFDLQGIEKQVLKLVPKLDTIFEKMIDERLRMMDEEESRNKNDFLQFLLKVKDESDSKTPLTMVQLKALLMDMIIGGTDTSSNTIEFAMAEMMKNPKIAKKAMEELVAVVGEQNIVEESHIQSLPYLKAVMKETLRLHPILPLLVPHCPSQTTVISNYTIPKGSRVFVNVWAIHRDPNYWENPLEFDPVRFLNGKFDFSGSDFRYIPFGSGRRNCAGIAMAERTVMYLLSTLLHSFDWKLKEGEKLEIEEKFGIVLKMKKPLLLIPTPRLSDSSLYQ 509
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 4161787 4164485 - CaPI482276_01g003780.1 Cam01g0378 117460
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0378 509 CDD CYP76-like 67 498 - -
Cam01g0378 509 FunFam Predicted protein 306 496 - -
Cam01g0378 509 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam01g0378 509 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 Pfam Cytochrome P450 39 495 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g0378 509 PANTHER OS08G0547900 PROTEIN 22 509 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0373 Cam-Chr1:4149560 Cam01g0378 Cam-Chr1:4161787 4.60E-23 dispersed
Cam01g0376 Cam-Chr1:4153629 Cam01g0378 Cam-Chr1:4161787 1.20E-33 dispersed
Cam01g0378 Cam-Chr1:4161787 Cam07g1479 Cam-Chr7:29432473 1.10E-96 dispersed
Cam01g0375 Cam-Chr1:4151252 Cam01g0378 Cam-Chr1:4161787 2.80E-36 proximal
Cam01g0377 Cam-Chr1:4155643 Cam01g0378 Cam-Chr1:4161787 1.70E-233 tandem
Cam01g0378 Cam-Chr1:4161787 Cam01g0379 Cam-Chr1:4166030 1.80E-248 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0378 - - - 0.0