Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam01g0378 | ATGGAACCCACTTCCAGATTCCTTCTAACTCTTACCCGCTTTCTTCTCACCTTCTTCGTCGGGTTTCTACCAATTCTTCTTTATGTCAAACGTTGGCGGCGGCGCTTGCGGCTGCCGCCAGGTCCTCGTGGCGTTCCGGTGCTGGGGAATCTGCCATTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCCGAAAGTACGGTCCAATTGTAAAGCTCCAATTGGGTGGAAAGATTGGTATAATCTTAAATTCACCAACGGTGGCGCGTGAGGTATTGAAGGACCACGATATCACATTCGCCAATCGTGACGTTCCTCAAGCAGGCCGAGTCGCCACGTACGGCGGTTTTGACATAACTTGGACCCCATATGGACCCGAGTGGCGGATGTTGAGAAAAGTTTGTACAATCAAGATGCTTAGCAATGCCAGTTTGGATTCTGTTTATGAGCTCCGTCGTAGAGAGGTGAGAAACACCGTGGGTCACTTGTACCGACGGGCGGGGGCGGCGGTCAACGTGGGAGAGCAAGGTTTTTTGACGGTTTTCAACGTGATTACGAGCATGTTGTGGGGTGGGACAGTGGAGGGGGACCAAAAGGACGCCTTTGCGGCTGAGTTTAGGGGGCTGGTTTCGGACATGACTGAGTTAGCGGGTAAGCCTAATATTTCTGACTTTTTTCCAAGTTTTGCACGCTTTGATCTCCAAGGAATCGAGAAGCAAGTGCTTAAGCTTGTCCCGAAATTGGACACCATTTTTGAAAAGATGATTGATGAACGATTGAGAATGATGGATGAAGAGGAGAGTAGGAATAAAAATGATTTCTTGCAGTTCTTACTTAAAGTCAAAGATGAAAGCGATTCCAAAACACCTCTCACCATGGTCCAACTTAAAGCCTTGCTAATGGATATGATAATAGGTGGAACAGACACATCATCAAACACCATTGAATTCGCAATGGCAGAGATGATGAAGAACCCAAAAATTGCAAAGAAAGCCATGGAAGAACTAGTAGCCGTGGTTGGTGAACAGAATATAGTTGAAGAATCCCATATACAGAGTTTGCCATATCTGAAAGCGGTAATGAAAGAAACCTTGCGTCTGCATCCAATTTTGCCGCTGCTAGTGCCGCACTGCCCCAGCCAGACCACCGTCATCTCCAATTACACAATCCCAAAGGGCTCTCGAGTGTTCGTCAACGTTTGGGCCATTCACCGAGACCCCAATTATTGGGAGAATCCATTGGAGTTCGACCCAGTGAGGTTCTTGAATGGTAAATTTGATTTCAGCGGGAGTGATTTTCGTTACATTCCATTTGGGTCCGGCAGAAGAAACTGTGCAGGGATAGCCATGGCGGAAAGAACAGTAATGTATTTGCTTTCCACACTTTTGCATTCCTTCGATTGGAAATTGAAGGAAGGTGAGAAGCTGGAAATTGAAGAGAAATTTGGGATTGTTTTAAAGATGAAGAAGCCTCTTCTTCTCATCCCAACACCTAGATTATCAGACTCCTCTTTGTATCAGTAA | 1530 | 46.27 | MEPTSRFLLTLTRFLLTFFVGFLPILLYVKRWRRRLRLPPGPRGVPVLGNLPFLDPELHTYFTELGRKYGPIVKLQLGGKIGIILNSPTVAREVLKDHDITFANRDVPQAGRVATYGGFDITWTPYGPEWRMLRKVCTIKMLSNASLDSVYELRRREVRNTVGHLYRRAGAAVNVGEQGFLTVFNVITSMLWGGTVEGDQKDAFAAEFRGLVSDMTELAGKPNISDFFPSFARFDLQGIEKQVLKLVPKLDTIFEKMIDERLRMMDEEESRNKNDFLQFLLKVKDESDSKTPLTMVQLKALLMDMIIGGTDTSSNTIEFAMAEMMKNPKIAKKAMEELVAVVGEQNIVEESHIQSLPYLKAVMKETLRLHPILPLLVPHCPSQTTVISNYTIPKGSRVFVNVWAIHRDPNYWENPLEFDPVRFLNGKFDFSGSDFRYIPFGSGRRNCAGIAMAERTVMYLLSTLLHSFDWKLKEGEKLEIEEKFGIVLKMKKPLLLIPTPRLSDSSLYQ | 509 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 4161787 | 4164485 | - | CaPI482276_01g003780.1 | Cam01g0378 | 117460 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam01g0378 | 509 | CDD | CYP76-like | 67 | 498 | - | - | |
| Cam01g0378 | 509 | FunFam | Predicted protein | 306 | 496 | - | - | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 90 | 111 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | Gene3D | Cytochrome P450 | 26 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam01g0378 | 509 | SUPERFAMILY | Cytochrome P450 | 39 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | Pfam | Cytochrome P450 | 39 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0378 | 509 | PANTHER | OS08G0547900 PROTEIN | 22 | 509 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g0373 | Cam-Chr1:4149560 | Cam01g0378 | Cam-Chr1:4161787 | 4.60E-23 | dispersed | |
| Cam01g0376 | Cam-Chr1:4153629 | Cam01g0378 | Cam-Chr1:4161787 | 1.20E-33 | dispersed | |
| Cam01g0378 | Cam-Chr1:4161787 | Cam07g1479 | Cam-Chr7:29432473 | 1.10E-96 | dispersed | |
| Cam01g0375 | Cam-Chr1:4151252 | Cam01g0378 | Cam-Chr1:4161787 | 2.80E-36 | proximal | |
| Cam01g0377 | Cam-Chr1:4155643 | Cam01g0378 | Cam-Chr1:4161787 | 1.70E-233 | tandem | |
| Cam01g0378 | Cam-Chr1:4161787 | Cam01g0379 | Cam-Chr1:4166030 | 1.80E-248 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam01g0378 | - | - | - | 0.0 |