Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam01g0379 | ATGGAACCCACTTCCAATTTCCTTCACAGTCTCATTCATTCTCTCAATTTCATAGATCCCAATAACCAAACCCGCTTTCTTCTCACCCTTTTCACCGCTTTTCTACTTCTTCTTTATGTTAAATTTTGGCCGCGGCGCTTCCGGCTGCCTCCGGGTCCCCCCGGCGTTCCTCTTCTCGGAAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCAAAAAATACGGCCCAATTGTCAAGCTCCAACTGGGTGGAAAGATTGGTATAATCGTCAACTCACCCTCCGTGGCACGTGAGATATTGAAGGATCACGATGTCATCTTTGCCAATCGTGATGTTCCTCAGGCAGGCCGAATCGCCACGTATGGCGGTTTTGACATAAGTTGGACCCCATACGGACCTGAATGGCGGATGTTGAGAAAAATTTGTACAATCAAGATGCTTAGCAATGCAGGTTTGGATTCTGTTTATGAGCTCCGCCATAGAGAGGTTAAAAATACCGTGGCTCACTTGTACCGGCGAGCTGGGTCGGCGGTGAACGTGGGAGAGCAGGTGTTTTTGACAGTTTTCAACGTGGTTACGAGCATGTTGTGGGGTGGGTCAGTGGATGGGGACAAAATTAGGGATGGCCTCGCGGCTGAGTTTAGACAAACGATTTCGGACATAACAGGGCTTTTGGGTAAGCCTAATGTTTCGGACTTTTTTCCGAGCTTGGCCCGTTTCGATTTCCAAGGAATTGAGAAACAAATGCTTAAGCTTGTTCTGAAATTGGACACTATTTTTGAAAAGATGATTGATGAACGATTGAAAATGACCGACGTTGATGAGGGTGCGAAGAAAAATGATTTCTTACAGTTCTTACTTAAAGTCAAAGATGAAGGCGATTCCAAAACTCCACTTACCATGGTTCAACTTAAAGGCTTGCTCATGGATATGGTGATTGGTGGAACAGACACATCCTCGAACACCATTGAATTCGCGATGGCAGAGATGATGAAGAACCCAAAAGTTCTAGAGAAAGCCAAGGAAGAACTAGCGATCGTGGTTGGGGAACAGAACATCGTAGAAGAGTCCCACATACAGAGTTTGCCATATCTGAAAGCGATAATGAAAGAAACCTTGCGTCTGCATCCAATTTTGCCGCTGCTAGTGCCGCACTCCCCTAGCCAGACCACCGTCATCTCCAAATACACAATCCCAAAGGGCTCTCGAGTTTTCTTCAACGTCTGGGCCATTCACCGAGACCCCAATAATTGGGAGAATCCATTGGAGTTCGTCCCAGAGAGGTTTTTCAATGATAAATTCGATTTCAGTGGGAGTGATTTTCGTTACCTTCCATTTGGGTCTGGCAGAAGAAATTGTGCAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTGCTTGCTACGCTTTTGCATTCCTTCGATTGGAAATTGAACGAAGTTGAGAAGATTGAAATCGAGGAGAAATTTGGGATTGTTTTAAAGATGAAGAAGCCTCTTGTTCTCATTCCAAGGCCTAGACTATCAGACCCCACTCTGTATCAGTAA | 1566 | 45.47 | MEPTSNFLHSLIHSLNFIDPNNQTRFLLTLFTAFLLLLYVKFWPRRFRLPPGPPGVPLLGNLPFLDPELHTYFTELGKKYGPIVKLQLGGKIGIIVNSPSVAREILKDHDVIFANRDVPQAGRIATYGGFDISWTPYGPEWRMLRKICTIKMLSNAGLDSVYELRHREVKNTVAHLYRRAGSAVNVGEQVFLTVFNVVTSMLWGGSVDGDKIRDGLAAEFRQTISDITGLLGKPNVSDFFPSLARFDFQGIEKQMLKLVLKLDTIFEKMIDERLKMTDVDEGAKKNDFLQFLLKVKDEGDSKTPLTMVQLKGLLMDMVIGGTDTSSNTIEFAMAEMMKNPKVLEKAKEELAIVVGEQNIVEESHIQSLPYLKAIMKETLRLHPILPLLVPHSPSQTTVISKYTIPKGSRVFFNVWAIHRDPNNWENPLEFVPERFFNDKFDFSGSDFRYLPFGSGRRNCAGIAMAERMVMYLLATLLHSFDWKLNEVEKIEIEEKFGIVLKMKKPLVLIPRPRLSDPTLYQ | 521 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 4166030 | 4167770 | - | CaPI482276_01g003790.1 | Cam01g0379 | 117461 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam01g0379 | 521 | FunFam | Predicted protein | 318 | 508 | - | - | |
| Cam01g0379 | 521 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | SUPERFAMILY | Cytochrome P450 | 50 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam01g0379 | 521 | Pfam | Cytochrome P450 | 50 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | Gene3D | Cytochrome P450 | 41 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | CDD | CYP76-like | 78 | 510 | - | - | |
| Cam01g0379 | 521 | PANTHER | OS08G0547900 PROTEIN | 26 | 521 | - | - | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 413 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0379 | 521 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g0377 | Cam-Chr1:4155643 | Cam01g0379 | Cam-Chr1:4166030 | 7.20E-232 | dispersed | |
| Cam01g0379 | Cam-Chr1:4166030 | Cam07g1479 | Cam-Chr7:29432473 | 5.30E-94 | dispersed | |
| Cam01g0378 | Cam-Chr1:4161787 | Cam01g0379 | Cam-Chr1:4166030 | 1.80E-248 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam01g0379 | - | - | - | 0.0 |