Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0419 ATGATGACGGGAGGAATGGAAGATGCGGTGGTGATCGGAGGATTGATGGCGGTGCAGTTCATTTACGCCGGAAATTCGGTGTTGTTGAGTTATTTGATGTCGTTAGGGCTTAATCCGCTCACCATCGTCGTTTGTTTTGCCTCTACAACTTCTCTGTTTCTCTCTCCTCTCGCTGTTTATTTTGAAAGGAGCAAATGGCCCAAAAAATTGAGTTTTAAGTTGACGCTTCAACTTGTCCTCATCTCCTTTGGCGGAGTAACTTTGTTTCAAACTCTGCTATTAGAAGGGATAAAGTTGACCTCCCCAGCCATGGCTACTGCCATGCCAAACCTGGCTCCTGGTCTAATCTTTATCATTGCTTGGTGTTGTAGATTAGAGAGAGTGAAACTTAGTTGTGTGTACAGCAAAGTAAAGATTTTGGGGACATTGCTTTGTGTAGTAGGTGCTCTAACAATGAGCATAATGCAAAGCACTATTACAATACCAGCAAAAGATCAACTAATTACAACATCTCAACCTACCATTGTACTCTTCAACAAGGAAAAGATTGTTGGTTGTTTGTACTTAATGCTGGCTGTCTTCATACTATCAACCAATCTTGTTTTGCAGGCAAAAGCCCTCGGTGAATTACCAGCTCCAATGTCATTGAGTGCTGTAACATCCTTCATTGGAGTGTTCACCACTGCAGCTGTAATGCTACTCCAAAATCACAACTTACAAACAGATTGGTCAATTCTCAACATCAAGGATTTACTTTCCTATTCTCTTTTTGGAGGAATAGTGAGTGGCATAAGCTTGAGCTTCAATGGATGGGCAATGAAGAAGAGAGGCCCAGTTTTGGTGTCAATTTTCAGTCCCATTGGAACTGTTTTCTCTCTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCTATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGAAAAAGAAGGTTATTGTGATGGAAGTGGCTATCAAAGTGATGACTTTGATCTTGAGAAACCTTTACTCTCTTGA 1053 41.5 MMTGGMEDAVVIGGLMAVQFIYAGNSVLLSYLMSLGLNPLTIVVCFASTTSLFLSPLAVYFERSKWPKKLSFKLTLQLVLISFGGVTLFQTLLLEGIKLTSPAMATAMPNLAPGLIFIIAWCCRLERVKLSCVYSKVKILGTLLCVVGALTMSIMQSTITIPAKDQLITTSQPTIVLFNKEKIVGCLYLMLAVFILSTNLVLQAKALGELPAPMSLSAVTSFIGVFTTAAVMLLQNHNLQTDWSILNIKDLLSYSLFGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSLILSVFTLGDTISIGSLAGMFLMFCGLYFVLWAKEKEGYCDGSGYQSDDFDLEKPLLS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4613448 4620370 - CaPI482276_01g004190.1 Cam01g0419 117501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0419 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Cam01g0419 350 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020(InterPro)
Cam01g0419 350 PANTHER WAT1-RELATED PROTEIN 16 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0419 Cam-Chr1:4613448 Cam02g1534 Cam-Chr2:28309157 1.20E-33 dispersed
Cam01g0419 Cam-Chr1:4613448 Cam10g0253 Cam-Chr10:4366707 7.70E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0419 - - - 0.0