Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam01g0458 | ATGAAAAAGAAGAATGTAAATCCAACAATTCAACAATCTTCTCATCCTCAACTTACTCACAACATTCATTCCATCGTCTTTCCCTATTTCGCTCGGTGGCAAGCTACTTATGGAAAAGTATTTATATATTGGTTGGGGACAGAGCCATTCTTATACATTGGAGAGCCAGAAATTGTGAAGATATTGTCAAAAGAAGTAAAAGCAAAGTATTGGGGAAAGCCATCAGTATTCAGAAATGATAGGAAATCAATGTTTGGAAATGGTTTGGTAATGGCTGAAGGAGATGAGTGGGTTCGTCAAAGACATATCATCACTCCTGCATTTAATCCTTCCAACTTGAAGGCGATGGCAAGCTTAATGGTGGGGTCCGCCACCGAAATGGTGGAGAGATGGACCAACCTCGTCAACTCCGGCCACCCTCAAATCGAAGTTGAGCAAGAAATAACTTCCACCGCCGGCGAAATCATTGCCAAAACCAGCTTCGGAATCCACCATGAAAGCGGCCGCCAAGTCTTCAACAAACTCCGCCATCTCCAAATCACTCTCTTCAAAACCAACCGCCTGGTGGGAGTCCCCTTCGCCGGAGTTCTAAACGCGGGCAAGGCACGGCAGGCCAAACGCCTTGGGAAGGAGATCGATGCCTTATTCCTGTCGGTAATAAGAGAGAGGAGAGAGAATTCGGCGGCGGAGGAGCAGCAGAATGATCTTTTGAGTTTGCTTTTGAAAGAGAGTAGTGGGGGCGGCGGAGAAGGGAGGAGGCCGTTGAGTACGGCGGAGCTGATTGATGAATGTAAAACGTTCTTCTTTGGTGGGCATGAAACGACGGCGTTGGCTCTGACGTGGACTTTGATGCTATTGGCTATTCATTCTGAGTGGCAGACAAAGTTGAGAGAGGAAATTAAGGAAGTGTTTGGTGATAATATAAAAACTCAGTTTGATTTCACCAACCTTGCTTCACTCAAAAAGATGGGATGGGTAATGAGTGAGGTTTTACGTCTATATCCATCAGCCCCAAACGTACAAAGACAAGCAAGAAAAGACATTACAATAAACGGACTCAAAATTCCAAATGGCACCAACATGTGGATCGATGTTGTAGCCATGCACCACGACCAAGCCCTTTGGGGCCCCCAAGTCAATGAGTTTCACCCTGAGAGGTTCCAAAACGACATCGTTTCGGGCGGCTGCACCCACAAGATGGGCTACTTGCCCTTTGGCTTTGGAGGAAGAATGTGTGTTGGTAGGCACTTGACGTTCATGGAGTATAAGATCGTATTGACTCTTATTTTGTCTAGGTTTTCCTTCTCTTTGTCGCCCGATTACCGACATTCGCCTTCCATAATGCTCTCGCTTCGACCTGCCCATGGTCTACCTCTCGTTTTTCGACTACTCGATGATTAA | 1401 | 46.18 | MKKKNVNPTIQQSSHPQLTHNIHSIVFPYFARWQATYGKVFIYWLGTEPFLYIGEPEIVKILSKEVKAKYWGKPSVFRNDRKSMFGNGLVMAEGDEWVRQRHIITPAFNPSNLKAMASLMVGSATEMVERWTNLVNSGHPQIEVEQEITSTAGEIIAKTSFGIHHESGRQVFNKLRHLQITLFKTNRLVGVPFAGVLNAGKARQAKRLGKEIDALFLSVIRERRENSAAEEQQNDLLSLLLKESSGGGGEGRRPLSTAELIDECKTFFFGGHETTALALTWTLMLLAIHSEWQTKLREEIKEVFGDNIKTQFDFTNLASLKKMGWVMSEVLRLYPSAPNVQRQARKDITINGLKIPNGTNMWIDVVAMHHDQALWGPQVNEFHPERFQNDIVSGGCTHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILSRFSFSLSPDYRHSPSIMLSLRPAHGLPLVFRLLDD | 466 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 4883904 | 4887982 | + | CaPI482276_01g004580.1 | Cam01g0458 | 117540 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam01g0458 | 466 | Pfam | Cytochrome P450 | 17 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 405 | 414 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam01g0458 | 466 | PRINTS | P450 superfamily signature | 403 | 412 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | P450 superfamily signature | 325 | 336 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | P450 superfamily signature | 270 | 287 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | P450 superfamily signature | 412 | 423 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | SUPERFAMILY | Cytochrome P450 | 22 | 462 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | E-class P450 group I signature | 279 | 305 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | E-class P450 group I signature | 259 | 276 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | E-class P450 group I signature | 412 | 435 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | E-class P450 group I signature | 34 | 53 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PRINTS | E-class P450 group I signature | 402 | 412 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g0458 | 466 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 14 | 458 | IPR050665 | GO:0004497(PANTHER) | |
| Cam01g0458 | 466 | Gene3D | Cytochrome P450 | 8 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g0458 | Cam-Chr1:4883904 | Cam05g0974 | Cam-Chr5:8760622 | 6.50E-160 | dispersed | |
| Cam01g0458 | Cam-Chr1:4883904 | Cam11g0572 | Cam-Chr11:7240175 | 2.70E-81 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam01g0458 | - | - | - | 0.0 |