Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0759 ATGGTTGTTGCTCTTGAAACCACCCGATTCCATGTTCTTGCTGTCGATGATAGCTTCATCGATAGGAAGTTGATTGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCAGTTGATTCCGGTACGAAGGCCTTGGAATTTCTTGGTCTTGTTGAAGATCATGATCACGATGAAGAAACAGACTCCAAAATCGCTCCCTCAAATCATCATCATCAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGTTACGAACTCCTTAGGAAGATCAAGGAATCGAAATCTCTCAAAGACATACCAGTTGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAATAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCCAGGAATTGA 474 41.14 MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDHDHDEETDSKIAPSNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8435561 8436295 + CaPI482276_01g007590.1 Cam01g0759 117841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0759 157 ProSiteProfiles Response regulatory domain profile. 11 150 IPR001789 GO:0000160(InterPro)
Cam01g0759 157 SMART REC_2 10 146 IPR001789 GO:0000160(InterPro)
Cam01g0759 157 Gene3D - 11 157 - -
Cam01g0759 157 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 152 IPR045279 GO:0009736(InterPro)
Cam01g0759 157 Pfam Response regulator receiver domain 12 143 IPR001789 GO:0000160(InterPro)
Cam01g0759 157 SUPERFAMILY CheY-like 9 148 IPR011006 -
Cam01g0759 157 CDD REC_typeA_ARR 12 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0759 Cam-Chr1:8435561 Cam05g2876 Cam-Chr5:35752053 2.20E-51 dispersed
Cam01g0759 Cam-Chr1:8435561 Cam05g2692 Cam-Chr5:34318970 4.30E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51231 PF00072 Response_reg 1.30E-20 CL0304 Cam TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0759 K14492 - csv:101210839 279.256