Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0780 ATGGGTGATGGTGTGAGACCCCCGCAGAAAAATGGGTTCGAATCTATTGCCCCAAAGACCCACCGAATTCCAATTTCAACCCGAAATAGGCGAAGAAAGAAGAAAGGGCCAAAGAAGGGAGAAAGAACTGAAGAACATCTCAACTTCGGCTTCAAGTTCCAGAGCGAAGCCCAGATTCCATTGTTGCAACTCGCCCCAGAGTTTCCTTCTAATCTCTTCATCTCTGTAGCCCGCGACAACCCTCTTTTTCCCCTTTTCATTCTTCAATATTCGCTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTTAAGAGGCGTAAAATTGAAGGCTCCTTGGCTACAGCGAAGCATACGGCTGAATTGCTTCGTTCTGTTATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGGGTTTTGCACATTATCAGAGAGGAGGATCTCTCTCTCACTACAGCTTCTATTGCTGGGTTAAGCTTATCAGCAGTTAGTGATGATGAAGATGACACTGAAAAAGATGATCGTCCGGTCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAACATCGATTCATCAAACTTCATCATCTGGAGGCGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAGTTCAAGGAGTCGAAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAGCTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAACAAGCAGTGGAGCACATTCATCAGAACGAGGTAATATTAACTTTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTACTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAATTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCTATGATTTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCAGTCGGATTGAATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTCGTGCTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCGGAAGTTCTACTCAATGAACTGAGGTCCCCATCAGAGCTACTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACGAACAATGGTTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTATTATTCAGCTGATGATTTGGTAATTAAAAGAAGGCCTTCTATAGGCAGCTGA 1533 44.29 MGDGVRPPQKNGFESIAPKTHRIPISTRNRRRKKKGPKKGERTEEHLNFGFKFQSEAQIPLLQLAPEFPSNLFISVARDNPLFPLFILQYSLIMPDVQALVNDFVIKLKRRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDTEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQTSIHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVTEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNNGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLVIKRRPSIGS 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8714496 8723026 + CaPI482276_01g007800.1 Cam01g0780 117862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0780 510 MobiDBLite consensus disorder prediction 1 43 - -
Cam01g0780 510 FunFam translation initiation factor eIF-2B subunit beta 287 495 - -
Cam01g0780 510 Gene3D - 287 494 IPR042529 -
Cam01g0780 510 MobiDBLite consensus disorder prediction 236 254 - -
Cam01g0780 510 SUPERFAMILY NagB/RpiA/CoA transferase-like 98 499 IPR037171 -
Cam01g0780 510 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 96 501 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
Cam01g0780 510 Pfam Initiation factor 2 subunit family 112 482 IPR000649 GO:0044237(InterPro)
Cam01g0780 510 MobiDBLite consensus disorder prediction 236 269 - -
Cam01g0780 510 MobiDBLite consensus disorder prediction 255 269 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0780 K03754 - csv:101220366 745.347