Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0787 ATGGCGCTCTCTGATAAACCCTCTCGCCAGTCTCTGATCCCCAGCTTCCTCTACTCCTCCCCTTCTTCCACTCGAACCCTCCCTCTCAAGAAGATGCTTCAATCTTCACCCACTCTCGATGGCGTTTCCTCTCCTACTAAGAGCTTTGTTATTCCCGCCCCCACCGAGCCGTCTAAGAAGATCGAGTTGTACTCGCCAGCCTTCTACGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTTACGCATATGGCTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATTGATCCTGCGAAATACAAAAGTATTTCGTCTGGTTTTGGAGTTCTGCTTAAGGAGCAGGGTGCGAGGGGTTTCTTCAGGGGTTGGGTGCCTACTCTCCTTGGATACAGTGCACAGGGTGCTTGCAAGTTTGGCTTTTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAGCTAAGTACAAGACCTTGATCTACCTTGCGGGTTCTGCATCTGCTGAGGTTATTGCTGATGTTGCACTTTGCCCTTTCGAAGCAGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTATCAGATGGACTTCCCAAGTTTGTCAGATCTGAAGGAGCTCTTGGGTTGTACAAGGGTATAGTTCCACTCTGGGGACGCCAGATTCCATACACGATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATATAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTATCTCATCCTGCTGATAATCTCGTGTCGTTCCTCAACAACGCCAAAGGAGCAACTGTTGGTGATGCTGTCAAGAAGCTCGGGTTATGGGGTCTCTTCACCCGTGGGCTACCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATCTATGATGCGTTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGCCCTGCACCTGCTGCCCCTCCACCTGCTGCTGCTGAGCTCGCAAAGGCGTGA 1107 48.87 MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSPTLDGVSSPTKSFVIPAPTEPSKKIELYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPPPAAAELAKA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8783646 8786752 - CaPI482276_01g007870.1 Cam01g0787 117869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0787 368 FunFam Phosphate carrier protein, mitochondrial 67 345 - -
Cam01g0787 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cam01g0787 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Cam01g0787 368 Gene3D Mitochondrial carrier domain 69 345 IPR023395 -
Cam01g0787 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cam01g0787 368 Pfam Mitochondrial carrier protein 69 154 IPR018108 -
Cam01g0787 368 Pfam Mitochondrial carrier protein 165 252 IPR018108 -
Cam01g0787 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Cam01g0787 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 53 353 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0787 Cam-Chr1:8783646 Cam05g1421 Cam-Chr5:16777767 6.30E-166 dispersed
Cam01g0787 Cam-Chr1:8783646 Cam10g0164 Cam-Chr10:3252668 4.00E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0787 K15102 - csv:101221771 666.381