Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0837 ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAACCCCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGTTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAGAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA 831 45.25 MMPILDHHHDHNNQPLLLPADDLAAAVPAPAFHRKKRMPRNRRRSSSNLPFFPSSSSSSSSSNNTPHLPPPRVIDPRNLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGLHLGDFIMVYQDCEEHNYVIQAKKACEQEIYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGGLEGFGSVENLSLDDFY 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9448613 9451994 - CaPI482276_01g008370.1 Cam01g0837 117919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0837 276 MobiDBLite consensus disorder prediction 31 73 - -
Cam01g0837 276 Pfam B3 DNA binding domain 83 180 IPR003340 GO:0003677(InterPro)
Cam01g0837 276 Gene3D - 79 196 IPR015300 -
Cam01g0837 276 MobiDBLite consensus disorder prediction 44 68 - -
Cam01g0837 276 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 36 184 IPR044800 GO:0003700(InterPro)
Cam01g0837 276 FunFam B3 domain-containing transcription factor FUS3 79 193 - -
Cam01g0837 276 ProSiteProfiles B3 DNA-binding domain profile. 83 185 IPR003340 GO:0003677(InterPro)
Cam01g0837 276 SMART B3_2 83 185 IPR003340 GO:0003677(InterPro)
Cam01g0837 276 CDD B3_DNA 81 183 IPR003340 GO:0003677(InterPro)
Cam01g0837 276 SUPERFAMILY DNA-binding pseudobarrel domain 81 184 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0837 Cam-Chr1:9448613 Cam09g0906 Cam-Chr9:9331855 2.10E-33 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51239 PF02362 B3 2.00E-17 CL0405 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0837 K09287 - csv:101222512 410.994