Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g0837 | ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAACCCCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGTTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAGAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA | 831 | 45.25 | MMPILDHHHDHNNQPLLLPADDLAAAVPAPAFHRKKRMPRNRRRSSSNLPFFPSSSSSSSSSNNTPHLPPPRVIDPRNLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGLHLGDFIMVYQDCEEHNYVIQAKKACEQEIYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGGLEGFGSVENLSLDDFY | 276 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9448613 | 9451994 | - | CaPI482276_01g008370.1 | Cam01g0837 | 117919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g0837 | 276 | MobiDBLite | consensus disorder prediction | 31 | 73 | - | - | |
Cam01g0837 | 276 | Pfam | B3 DNA binding domain | 83 | 180 | IPR003340 | GO:0003677(InterPro) | |
Cam01g0837 | 276 | Gene3D | - | 79 | 196 | IPR015300 | - | |
Cam01g0837 | 276 | MobiDBLite | consensus disorder prediction | 44 | 68 | - | - | |
Cam01g0837 | 276 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 36 | 184 | IPR044800 | GO:0003700(InterPro) | |
Cam01g0837 | 276 | FunFam | B3 domain-containing transcription factor FUS3 | 79 | 193 | - | - | |
Cam01g0837 | 276 | ProSiteProfiles | B3 DNA-binding domain profile. | 83 | 185 | IPR003340 | GO:0003677(InterPro) | |
Cam01g0837 | 276 | SMART | B3_2 | 83 | 185 | IPR003340 | GO:0003677(InterPro) | |
Cam01g0837 | 276 | CDD | B3_DNA | 81 | 183 | IPR003340 | GO:0003677(InterPro) | |
Cam01g0837 | 276 | SUPERFAMILY | DNA-binding pseudobarrel domain | 81 | 184 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0837 | Cam-Chr1:9448613 | Cam09g0906 | Cam-Chr9:9331855 | 2.10E-33 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51239 | PF02362 | B3 | 2.00E-17 | CL0405 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g0837 | K09287 | - | csv:101222512 | 410.994 |