Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g0843 | ATGGAGGGGGAGATGGGAGAGCGCGGTGGGGTTGTGAGTGATTGCGTTGGGTTTAGGCAGCGGAGGAATCTTCTTAATTATTGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTGCTGCCACGACCAATAAAGAAGTTGATGGGCACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGTCAACTTCACAACGTTACAATGCATGCAGATGTGGAAACGGATGAAGTATATGCCCAGATGACATTACAGCCTCTGACTGCACAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCTAGTAGACAGCCAACAAATTACTTTTGCAAAACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTTTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTCGAATGGAAGTTTAGGCATATTTTTCGAGAGAATAAGATTGTTTGCTTGGTTGGTCTCTGGGCCAAGAACAGAAGTTTCTTGCAAGGTGGTTTTGGAGATTCTATGTGGCAAAGACCGTCTGTGGAGGTATTTCATTGCAATGCCACATCCCATTTTGGTACTCTTGGGCAACTTTGGACTTAA | 807 | 47.09 | MEGEMGERGGVVSDCVGFRQRRNLLNYWGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRENKIVCLVGLWAKNRSFLQGGFGDSMWQRPSVEVFHCNATSHFGTLGQLWT | 268 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9502344 | 9510230 | - | CaPI482276_01g008430.1 | Cam01g0843 | 117925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g0843 | 268 | CDD | B3_DNA | 159 | 238 | IPR003340 | GO:0003677(InterPro) | |
Cam01g0843 | 268 | Pfam | B3 DNA binding domain | 160 | 222 | IPR003340 | GO:0003677(InterPro) | |
Cam01g0843 | 268 | Gene3D | - | 158 | 242 | IPR015300 | - | |
Cam01g0843 | 268 | SUPERFAMILY | DNA-binding pseudobarrel domain | 144 | 220 | IPR015300 | - | |
Cam01g0843 | 268 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 52 | 225 | IPR044835 | GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0843 | Cam-Chr1:9502344 | Cam03g0796 | Cam-Chr3:9050713 | 1.20E-89 | dispersed | |
Cam01g0843 | Cam-Chr1:9502344 | Cam01g2547 | Cam-Chr1:37060138 | 1.70E-91 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51242 | None | None | None | None | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g0843 | K14486 | - | csv:101208098 | 388.267 |