Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0865 ATGTCAAAAGAGGAGGTTATTATTTTGGACTGTTTGATCAGCCCATTTTGCAATAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGAGTTATGAGAGTAGGGAAGAGGATTTGTTTGGTTTGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCAAACCCTATTTATAAGAAAGTGCCTGTTCTCTTGCATAATGGCAAGCCACTGAATGAAAGTTCTATTATTGTCAACTATATTGATGAGACTTGGCCATCTTCTTCCCCACTTCTTCCTTCTTCGCCCTATGAAAGAGCTCAAGCTCGGTTCTGGATTGATTACATCGATAAAAAGGTATTTGATGTGGGTTCCAAGATTTGGAAGAGCAATGGAGAAGAGCAAGAGGCAGCCAAGAAAGAGTTGATAGAGATTTTGAAGCAATTGGAGGAAGCTTTAGGTGACAAAGATTTCTTTGGAGGTGAAAGGTTTGGGATTGTGGATGTGATTGCAATCCCATTCACAAGTTGGTTCAATGCTTATGAGAAAGTTGGGAACTTCAAAGTGGAAGAACATTGCCCTAAATTCTCAGCTTGGGAAAAGAGATGTTTGCAAAAGGAGACTGTTGCAAGTGTTATCCCTTGCCCTGAGAAGATCTATAACTTTCTCACCTCCATGAGAAACAACCTTGGCCTTGAATAG 675 40.3 MSKEEVIILDCLISPFCNRVKIALNEKGVSYESREEDLFGLKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVNYIDETWPSSSPLLPSSPYERAQARFWIDYIDKKVFDVGSKIWKSNGEEQEAAKKELIEILKQLEEALGDKDFFGGERFGIVDVIAIPFTSWFNAYEKVGNFKVEEHCPKFSAWEKRCLQKETVASVIPCPEKIYNFLTSMRNNLGLE 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10038010 10039443 - CaPI482276_01g008650.1 Cam01g0865 117947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0865 224 CDD GST_N_Tau 6 83 - -
Cam01g0865 224 Pfam Glutathione S-transferase, C-terminal domain 119 197 IPR004046 -
Cam01g0865 224 SUPERFAMILY GST C-terminal domain-like 81 220 IPR036282 -
Cam01g0865 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cam01g0865 224 CDD GST_C_Tau 95 217 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cam01g0865 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Cam01g0865 224 ProSiteProfiles Glutaredoxin domain profile. 1 97 - -
Cam01g0865 224 Coils Coil 123 146 - -
Cam01g0865 224 Gene3D - 93 224 - -
Cam01g0865 224 Gene3D Glutaredoxin 2 92 - -
Cam01g0865 224 Pfam Glutathione S-transferase, N-terminal domain 11 84 IPR004045 -
Cam01g0865 224 FunFam Tau class glutathione S-transferase 1 92 - -
Cam01g0865 224 SFLD Main (cytGST) 2 221 - -
Cam01g0865 224 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Cam01g0865 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 213 IPR010987 -
Cam01g0865 224 FunFam Glutathione S-transferase U20 93 224 - -
Cam01g0865 224 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0865 Cam-Chr1:10038010 Cam07g1082 Cam-Chr7:25284797 8.50E-73 dispersed
Cam01g0865 Cam-Chr1:10038010 Cam04g1263 Cam-Chr4:26581747 3.90E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0865 K00799 - csv:101213628 412.92