Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0946 ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAAAAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTCAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAATGCAAACCGTCTGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTGTTCACTCCACCGATAAAAGCACTCAATCAAAGTAACACGAAAAATGTGTACTTCCTCACAATTGGATTTCACCAAATATTGAATTATAAAAGG 576 39.76 MPYDPHFRADVPVNVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKECKPSENDDLNLYFGLYEVFTPPIKALNQSNTKNVYFLTIGFHQILNYKR 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11791579 11794367 - CaPI482276_01g009460.1 Cam01g0946 118028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0946 192 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 17 161 - -
Cam01g0946 192 Pfam Phloem protein 2 18 161 IPR025886 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0946 Cam-Chr1:11791579 Cam01g0951 Cam-Chr1:12187221 4.50E-38 dispersed
Cam01g0945 Cam-Chr1:11782041 Cam01g0946 Cam-Chr1:11791579 5.30E-31 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0946 - - - 0.0