Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0989 ATGAGAATGAGGGTGACGAGGAAGATGGAGAAGTTGAGGAAGATGATGAAGATGAAGTCGAGGACGATGATGAAGATGAAGAAGACTATTGATAACAAAAAAGTGCCATCAAGTAATGAAGATAACATTGTAGACACGAGTAACACTCCCACTAATAACCAAATTCGTGATGTTACACGAGAAGTCGGATTGCATCGTGTGATTGAGGCAAGAGGAGGAAGAATTTCTATCTCATGGGATCCTTCCCCTGAGAAACCAATTGGGAAAGTCGCAAATCTCTTTAGTAGTGAGATCGAAAAGAGAGAAATTTTCTTGGTTGTAATGGAAGATAATGAGTTAAAAAACAACAAAGAAATGATAATGGAGGATTCACACAATAAGCTTCTAGAAAACACTATAAAAAGCTACACAAAGCTCCATAGCTTCAAGCAAATTTTCAATGGCTTTGCAGTTCACACAACCCCATCACAAGCCTCAAAGCTTAGAGAAGTTGATGGAGTGAAATTGGTTGAGTTAGATAGAGGAGTGAGGAAAATGACTACTTATACCCCTGAGTTTCTAGGACTAGTGCCCTCCAATAATCATAAATATTATTATAATTATAGTGTTATTGGTGGTGGTGGTGAAGGCATTTTGATTGGGTTTGTGGACTCTGGTATTTACCCAACACACCCAAGTTTTAGTTTTGGTAATTTTGATCATCAAGAAGAGGAGTTGTTTTGTGGGGTTTGTGAAGAAGGTCCTTTTTTCCCAAAAGCTTCTTGCAATGGGAAGATAGTGAGTGCAAGGTTTTTTTCTACTGGGGCTCAGGCTGTTGCAAAGCTTAACTCTTCCCTTGATTTTCTCTCTCCATTTGATGCTGAAGGTCATGGAAGCCATGTGGCATCCATAGCTGCTGGGAATGCAGGTGTTCCAGTTATTGTAAATGGTTTCTTCTATGGATTGGCCAGTGGAATCGCGCCACGTGCACGAATTGCTGTTTACAAGGCCGTGTATCCAACTGTGGCTACTCTAACCGACGTAATTTCAGCAATAGATCAAGCAGTGGTTGATGGGGTTGATATATTGGCATTATCAGTTGGACCAAATGAACCGCCCGAGGTAGGATTTACCTTCCTAAGCATATATGACATTGCCATATTATCTGCTACAAGAGCTGGAATCCTTGTTGTTCAAGCAGCCGGAAATAATGGCCCGGCCCGGGCAACCGTCGTCTCTTACAGCCCTTGGGCTATTGGCGTTGCAGCCTCCGGCACTGACAGAGTTTATTTGGCCTCACTTCTTCTCGGCAATGGCCAAAAAATTGCAGGAGTAGGACTGTCTGGACCCACCTTAGGGAGGGAGTTTTTCCTACACAAGTTAGTATTGGCTGAGGATGCAAGGAGGCCAAATGAAACACATCCCAACGTACCAAATTACAATGAAGAGTGCCAAAATCCCGAAGCTTTTGACCCAAATATTGTTGAAAACAGCATAGTCCTCTGCTCTTTCTCACAAGGATTCCTCAATGGAACCTCCTCTCTTAAAGCCATCATTCACACTGCAACAACACTCAGATTCATGGGTTTTGTTCTCCTTGCAAATCCAAACTATGGTGATTTCATTGCAGAGCCCATCCCTTTCAAAGTTCCAGGCATACTCGTCCCGGTCGTATCAGATACTAAGGTGATACTGAAATACTATGAAGAAAATACATGGAAGGATAGAAGGGGAATTGTTAGTGAATTTAAAGGGAAAGCAGGCATTGGAGAAGGAAGAGTTGCTTCATTTGGAAGGCAAGCAGCCAGTGTTAGCAGATTTTCATCAAGAGGACCAGATTACATTAACATAAATAGGACTATAGCTGATGTACTAAAGCCAGATATTCTTGCACCAGGTCACCAAATCTGGGCTGCTTGGAGCCCTCTTAGTGCCTCACAGCCACTTTTAAAGGGATACCATTTTGCACTGTTATCTGGAACAAGTATGGCAGCACCTCATATTGTGGGAATAGCAGCACTTATCAAGCAAAAGTATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCCACAACTGCTACAAAGTATGATATGAATGGAGACCTTATTCAGGCAGAGGGATTCAACCTTCATAGTTTATATCCTTCTACTCCCTTCGACTTTGGCGCTGGCCTCGTTTCTCCGACCAACGCTTTGGACCCGGGACTCGTCTTCCCTTCAGAATATGAAGACTATATAAACTTCTTGTGCTCTTTACCTGGGGTTGATCCTACCGTCATCAGAAGTGCCACCGGAGGACAGTGCAATGCCTCTATCCCACAGCCACACCCTGCAGATCTGAACCTTCCTTCAGTCACCATATCATCATTGGTTGGGAATCAGGTAGTGCAGAGAAGAGTGAAGAATGTAGGAGGCAAAGTGGAGACTTATGTGTGGTCAGTGATACCGCCAAATGGGACAACAGTCAACATCAATCCGCCATGGTTCACCGTAGCGCCCGAAGAAGTCCAAAACTTGGAAATACAAATCAATGTCACACACAAAATAGATCATTTTACCTTCGGGGAGATTATTTTGACAGGAAGTTTAAACCATATTGCAAGAATCCCTTTGTCAGTTTTGGCTGTTTCTGCATCCTGA 2625 43.09 MRMRVTRKMEKLRKMMKMKSRTMMKMKKTIDNKKVPSSNEDNIVDTSNTPTNNQIRDVTREVGLHRVIEARGGRISISWDPSPEKPIGKVANLFSSEIEKREIFLVVMEDNELKNNKEMIMEDSHNKLLENTIKSYTKLHSFKQIFNGFAVHTTPSQASKLREVDGVKLVELDRGVRKMTTYTPEFLGLVPSNNHKYYYNYSVIGGGGEGILIGFVDSGIYPTHPSFSFGNFDHQEEELFCGVCEEGPFFPKASCNGKIVSARFFSTGAQAVAKLNSSLDFLSPFDAEGHGSHVASIAAGNAGVPVIVNGFFYGLASGIAPRARIAVYKAVYPTVATLTDVISAIDQAVVDGVDILALSVGPNEPPEVGFTFLSIYDIAILSATRAGILVVQAAGNNGPARATVVSYSPWAIGVAASGTDRVYLASLLLGNGQKIAGVGLSGPTLGREFFLHKLVLAEDARRPNETHPNVPNYNEECQNPEAFDPNIVENSIVLCSFSQGFLNGTSSLKAIIHTATTLRFMGFVLLANPNYGDFIAEPIPFKVPGILVPVVSDTKVILKYYEENTWKDRRGIVSEFKGKAGIGEGRVASFGRQAASVSRFSSRGPDYININRTIADVLKPDILAPGHQIWAAWSPLSASQPLLKGYHFALLSGTSMAAPHIVGIAALIKQKYPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNLHSLYPSTPFDFGAGLVSPTNALDPGLVFPSEYEDYINFLCSLPGVDPTVIRSATGGQCNASIPQPHPADLNLPSVTISSLVGNQVVQRRVKNVGGKVETYVWSVIPPNGTTVNINPPWFTVAPEEVQNLEIQINVTHKIDHFTFGEIILTGSLNHIARIPLSVLAVSAS 874
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13542628 13557296 + CaPI482276_01g009890.1 Cam01g0989 118071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0989 874 ProSitePatterns Serine proteases, subtilase family, serine active site. 653 663 IPR023828 -
Cam01g0989 874 Pfam Subtilase family 208 694 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam01g0989 874 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 213 224 IPR023827 -
Cam01g0989 874 PRINTS Subtilisin serine protease family (S8) signature 652 668 IPR015500 -
Cam01g0989 874 PRINTS Subtilisin serine protease family (S8) signature 208 227 IPR015500 -
Cam01g0989 874 PRINTS Subtilisin serine protease family (S8) signature 286 299 IPR015500 -
Cam01g0989 874 Pfam Peptidase inhibitor I9 104 177 IPR010259 -
Cam01g0989 874 SUPERFAMILY Subtilisin-like 179 731 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g0989 874 Gene3D - 420 590 - -
Cam01g0989 874 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 123 827 IPR045051 -
Cam01g0989 874 Pfam Fibronectin type-III domain 774 868 IPR041469 -
Cam01g0989 874 Gene3D - 744 871 - -
Cam01g0989 874 ProSitePatterns Serine proteases, subtilase family, histidine active site. 290 300 IPR022398 -
Cam01g0989 874 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 89 177 IPR037045 -
Cam01g0989 874 ProSiteProfiles Serine proteases, subtilase domain profile. 184 727 - -
Cam01g0989 874 Gene3D Peptidase S8/S53 domain 210 740 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0989 Cam-Chr1:13542628 Cam11g1205 Cam-Chr11:24014317 2.60E-162 dispersed
Cam01g0989 Cam-Chr1:13542628 Cam05g0909 Cam-Chr5:8165522 2.70E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0989 - - - 0.0