Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g0991 ATGGCTCTGCGGGACTTCCTCTTCCTGTTTTTCTTCTTGATCTTTGATTCTATTCCATTTACTCGTGCTCTTACTGATGCTTCTGATGTTCAAGCTTTGCAAGTTATATACACCTCATTGAACAGTCCTCCTCAGCTGACTGGTTGGATTGGTAATGGAGGCGATCCATGTGTAGAGTCATGGAAAGGGGTGACTTGTGAAGGATCTGCTGTTGTTTCCATTGAGATTTCTGGGTTAGGGCTGAATGGAACGATGGGTTATGCGCTCTCAAGTTTTTTGTCATTGAAAGAGCTTGATATGAGCGACAACAATATTCATGACACGATTCCTTACCAATTGCCGCCGAACCTCACGAGCCTAAATATGGCAAAAAACAGCTTAAGTGGTAATCTTCCTTATTCCTTTTCCACCATGGCTTCTCTCAATTATTTGAATATGAGCCACAATTTGCTATCTCAGGCGATAGGAGATGTTTTCACCAATCTTACTACCCTGGGGACCTTGGACCTTTCTTTCAACAACTTTACTGGGGATCTTCCCAAGTCCTTGGGAACTTTATCCAATATTTCTTCCTTGTTTTTGCAGAACAACCAATTGACTGGCTCTATCAATATTCTTATCGATTTGCCTCTGACCACTCTAAATGTAGCAAATAATAATTTCAGTGGATGGATACCTCAAGAACTGAAGTCGGTTGAAAATTTCATGTATGATGGAAATTCATTTGACCATAGTCCTGCACCTCCTCCACCACCTTTTACTCCACCTCCTCCTGGTAGATCTCGTAGTAGCCCCAGACATCCTGGGTCTAGCGGTGGCACCCATACTGCCCCAAGTTCTGATGGGAGTTCATCCCACTCAAACAAAGGCTTGCCAGTTTTGGCTATAGTGGGGATAATTTTGGGTGCTATAATTTTTGTCCTCATTGTGTTAGTTGCTTTTGCTGTCTGCATCCAGAAGAGAAAACGAAAGAACATTGGTCTTCGAGCTTCCAGTGGAAGGCTGTCTGTTGGCACCAGCGTGAATGCTGAGGTGCAAGAGCATCGGGTGAAAAGTGTTGCTGCTGTTGCCGATATTAAGCCTCTTCCTGCAGAGAAAATGAATCCTGAGAGGTTGCCGGCGAAAAATGGATCGGTGAAAAGAATAAAGTCCCCTATTACTGCTACTTCGTACACCGTTGCTTCCCTTCAAACTGCAACAAATAGTTTTAGCCAAGAATGCATAGTTGGTGAAGGTTCTCTTGGTCGGGTTTACAAAGCTGACTTTCCTAACGGGAAGATAATGGCGATTAAGAAAATCGATAATGCAGCGCTGTCACTACAGGAAGAAGACAATTTTCTTGAAGCAGTTTCAAACATGTCAAGGTTGAGGCATACAAACATTGTCACACTAAATGGTTATTGTGCAGAGCACGGCCAGCGTCTTCTAGTTTATGAGTTCATTGGAAATGGAAGTTTACATGACATGCTGCATTTTGCTGAAGAAAGTAGTAAGACACTGACTTGGAACGCACGTGTCCGGGTAGCACTTGGAACTGCTAGAGCTTTAGAATACTTGCATGAGGTTTGCTTGCCTTCTGTTGTACATAGAAACTTGAAGACTGCAAACATATTACTTGATGAAGATCTCAACCCCCATTTGTCAGATTGTGGTTTGGCTGCTTTAACACCCAACACAGAGCGGCAGATTTCTACTCAGATGGTTGGTTCATTTGGCTATAGTGCTCCGGAATTTGCCTTGTCAGGAATATACACTGTCAAAAGTGACGTGTACAGCTTTGGGGTGGTGATGTTGGAGCTCTTGACTGGCCGAAAGCCGCTTGACAGTTCTAGGGTGAGATCAGAGCAGTCACTTGTGAGATGGGCTACTCCCCAACTACATGATATCGACGCCTTAGCAAAAATGGTAGATCCTACTTTGAATGGAATGTACCCTGCGAAATCTCTGTCCCGCTTTGCTGACATCATTGCTCTCTGTGTTCAGCCTGAGCCTGAATTTCGACCTCCCATGTCCGAAGTAGTACAAGCACTGGTGCGTTTAGTGCAAAGAGCGAGTGTGGTAAAAAGGCATTCGAGCGACGAGACAGGTTTCAGTTACAGAACACCTGAGCACGATGCAGTTGAGTTGCCATTTTGA 2136 44.19 MALRDFLFLFFFLIFDSIPFTRALTDASDVQALQVIYTSLNSPPQLTGWIGNGGDPCVESWKGVTCEGSAVVSIEISGLGLNGTMGYALSSFLSLKELDMSDNNIHDTIPYQLPPNLTSLNMAKNSLSGNLPYSFSTMASLNYLNMSHNLLSQAIGDVFTNLTTLGTLDLSFNNFTGDLPKSLGTLSNISSLFLQNNQLTGSINILIDLPLTTLNVANNNFSGWIPQELKSVENFMYDGNSFDHSPAPPPPPFTPPPPGRSRSSPRHPGSSGGTHTAPSSDGSSSHSNKGLPVLAIVGIILGAIIFVLIVLVAFAVCIQKRKRKNIGLRASSGRLSVGTSVNAEVQEHRVKSVAAVADIKPLPAEKMNPERLPAKNGSVKRIKSPITATSYTVASLQTATNSFSQECIVGEGSLGRVYKADFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHTNIVTLNGYCAEHGQRLLVYEFIGNGSLHDMLHFAEESSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEDLNPHLSDCGLAALTPNTERQISTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDETGFSYRTPEHDAVELPF 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13669430 13674688 - CaPI482276_01g009910.1 Cam01g0991 118073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g0991 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 481 691 - -
Cam01g0991 711 CDD STKc_IRAK 409 680 - -
Cam01g0991 711 Pfam Protein kinase domain 406 675 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g0991 711 MobiDBLite consensus disorder prediction 244 263 - -
Cam01g0991 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 211 682 IPR046959 -
Cam01g0991 711 SUPERFAMILY Protein kinase-like (PK-like) 383 677 IPR011009 -
Cam01g0991 711 Gene3D Transferase(Phosphotransferase) domain 1 481 704 - -
Cam01g0991 711 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Cam01g0991 711 Gene3D Ribonuclease Inhibitor 25 252 IPR032675 -
Cam01g0991 711 Pfam Leucine Rich Repeat 165 186 IPR001611 GO:0005515(InterPro)
Cam01g0991 711 Pfam Leucine Rich Repeat 94 113 IPR001611 GO:0005515(InterPro)
Cam01g0991 711 Pfam Leucine Rich Repeat 211 230 IPR001611 GO:0005515(InterPro)
Cam01g0991 711 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Cam01g0991 711 MobiDBLite consensus disorder prediction 264 286 - -
Cam01g0991 711 ProSiteProfiles Protein kinase domain profile. 403 680 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g0991 711 MobiDBLite consensus disorder prediction 240 286 - -
Cam01g0991 711 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 368 480 - -
Cam01g0991 711 SUPERFAMILY L domain-like 25 232 - -
Cam01g0991 711 Gene3D Phosphorylase Kinase; domain 1 366 480 - -
Cam01g0991 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0991 Cam-Chr1:13669430 Cam08g0918 Cam-Chr8:14075535 1.30E-135 dispersed
Cam01g0991 Cam-Chr1:13669430 Cam07g1140 Cam-Chr7:25833262 1.70E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84871 PF00069 Pkinase 3.50E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g0991 - - - 0.0