Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1173 ATGGGTTTGAGCCTTTCGAAAGCATTAAGGGAAAAGAAGCTATACCCATTGATAACCGGAGCTGAGGCGAAAGCGAAGAATGGCACTGTGGATGAAGCCATGCTTTGCAAGCCAAAAACATTGGATCATTCAAAAGTGAAAGGGAAAATATTGGTTTGCTTGAGAGGAGACAATGCAAGAGTGGAGAAAGGAGAAGAAGCTGCCCTTGCTGGTGCTGCCGGAATGATTGTATGCAACGATAAGCTCAGTGGGTTTGAAACCATTGCTGATTTCCATCTTCTTCCAGCTTCCCATATCAATTACAATGATGGTCAAGCTGTTTTCTCTTACATCAATTCCACCAAAAATCCGATGGGGTATTTAATCCCACCGTCAGCCAAAGTTAACACCAAACCTGCTCCTACTATGGCGGACTTCTCATCCCGAGGACCCAACGCTATTTCTCCTCAGATTATCAAGGCGGACGTGAGTGCGGCAGGTGTAAATATAATAGCAGCATTCTCAGGAGCTGTAAGTCCTACAGGGGAGGCATTCGACAACAGAACAGTTCCATTCATAACAATGTCAGTGGCCTGGTCGGAGAAGCAGTTTGAAGTGACGATGATCGGAGTTGTGCCAAAGAATCAGGTTGTTGACGGCGTGCTGATTTGGACTGATGGCAAGCACTTCGTTAGAAGTCCAATCCTCGTTTCTTCTGGATTCTTCTGA 708 45.76 MGLSLSKALREKKLYPLITGAEAKAKNGTVDEAMLCKPKTLDHSKVKGKILVCLRGDNARVEKGEEAALAGAAGMIVCNDKLSGFETIADFHLLPASHINYNDGQAVFSYINSTKNPMGYLIPPSAKVNTKPAPTMADFSSRGPNAISPQIIKADVSAAGVNIIAAFSGAVSPTGEAFDNRTVPFITMSVAWSEKQFEVTMIGVVPKNQVVDGVLIWTDGKHFVRSPILVSSGFF 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18553372 18554723 - CaPI482276_01g011730.1 Cam01g1173 118255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1173 235 Gene3D - 187 233 - -
Cam01g1173 235 Gene3D - 10 129 - -
Cam01g1173 235 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 180 IPR045051 -
Cam01g1173 235 FunFam subtilisin-like protease SBT1.5 1 128 - -
Cam01g1173 235 SUPERFAMILY Subtilisin-like 133 178 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1173 235 CDD PA_subtilisin_like 1 121 - -
Cam01g1173 235 Pfam PA domain 33 106 IPR003137 -
Cam01g1173 235 Gene3D Peptidase S8/S53 domain 130 180 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1173 235 SUPERFAMILY PA domain 43 114 IPR046450 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1173 Cam-Chr1:18553372 Cam10g0384 Cam-Chr10:6132975 9.30E-54 dispersed
Cam01g1173 Cam-Chr1:18553372 Cam01g1175 Cam-Chr1:18617582 2.70E-13 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1173 - - - 0.0