Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1174 ATGATAACTAAGCGTGTTATGTCATATGTTGTGATATTGGGATCCCATTCACATGGGTTAGAAGTTACTGAGGAAGATCTTGAAAGGGTGGTTAATTCCCATCACAAATTGCTTGGATCCTTCTTGGGCAGTGATGAGAAGGCAAAAGAGGCCATATTTTACTCCTATAAGAAGCATATTAACGGCTTTGCAGCCATTCTGGAGGAGGAAGACGCAACCCAACTTGCAAATCATCCCGAGGTAGCAGCAGTATTGCCAAACAGAGCGAAAGAATTACACACAACACATTCATGGGAGTTTATGCATTTGGAGAAGAATGGTATAATTCCCCCTTCTTCTCCTTGGCACAGGGCTAAATCTGGAAAAGATGTCATTATTGCCAACCTTGACACTGGTGTATGGCCAGAGTCCAAGAGTTTCGGAGAACAGGGCATAATTGGACCGTCAGTTCCAAGCTCCTGTTGA 465 43.66 MITKRVMSYVVILGSHSHGLEVTEEDLERVVNSHHKLLGSFLGSDEKAKEAIFYSYKKHINGFAAILEEEDATQLANHPEVAAVLPNRAKELHTTHSWEFMHLEKNGIIPPSSPWHRAKSGKDVIIANLDTGVWPESKSFGEQGIIGPSVPSSC 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18554746 18556162 - CaPI482276_01g011740.1 Cam01g1174 118256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1174 154 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 3 93 IPR037045 -
Cam01g1174 154 Gene3D Peptidase S8/S53 domain 94 153 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1174 154 SUPERFAMILY Subtilisin-like 25 142 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1174 154 Pfam Peptidase inhibitor I9 8 93 IPR010259 -
Cam01g1174 154 PANTHER PEPTIDASE S8 8 142 IPR050131 GO:0004252(PANTHER)|GO:0005615(PANTHER)
Cam01g1174 154 FunFam Subtilisin-like protease SBT5.3 2 93 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1174 Cam-Chr1:18554746 Cam10g0384 Cam-Chr10:6132975 9.70E-44 dispersed
Cam01g1174 Cam-Chr1:18554746 Cam01g1175 Cam-Chr1:18617582 5.50E-79 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1174 - - - 0.0