Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1227 ATGCCAACCAAAATTCCTTTGCAGCTACATGGATTACCCATAATATTGTTGCTCCTCAGCTTGGCAGCACCTACCTCCGCTGCCCTCCAGGTGGGATTCTACAAGGGAAAATGTGGCTTTATAGATGTTGAATCTGTTGTCAGAGACGTTGTCACCGCCGCACTCGAAGGAGATCGAACCCTCGTTGCTGCTCTTCTTCGCTTACACTTCCATGACTGCTTTGTCTCTGGATGTGACGCTTCCCTCCTCCTAGATGGAAGCAATAGCGAGAAGGAAGCTCCTCCAAACTTCAGCGTGCGAGGCTATGATCTTATTGATGCAGTCAAGATTCAGGTTGAGAAGGCATGTCCTGGAGTTGTCTCTTGTGCTGATATCATTGCCATGGCTACTAGAGATGCTGTCAATTGGGCTGGGGGAGGACGATATAGCATTGAAACCGGACGACGAGATGCCTTCCGACCAGCCGATATTGTCGATCTTCCTGGGCCTTCAATATCTGTCTCAGATTCCATTGCAGCCTTCTCCAAAAGGAACCTTAATGTTACAGATATGGTTTATCTTCTTGGTGGCCACACTGTTGGTGTATCACAATGCATTTTCTTCAAGGATCGCCTCTATAATTACAAAGACACAGGGGGACCGGACCCCACCATCGATCCGTGGTTTCTCAATGACCTACAAAGCCAATGCCCTCAAGATTCCAACGACGACAACACCGTATTTCTTGACCAGAACCGTATGAGTTCTTTCGTCGTTGACAAGTCGTTTTATAGGCAGATATCGCAACAAAGAGGAATATTGGAAATTGATCAACAGCTTGCTTTGGATCCATTGACAAAGGACTTCGTATGGAATGTGGCATTCCGATCCGACTTCGCCTTCAAGTTTGGACAAGCATTGATCAAGATGGGAAGAATTCAAGTTCTTACTGGCTCAGAAGGGGAGATTAGAAGAACATGTGTGGCTGTTAATTGA 975 46.56 MPTKIPLQLHGLPIILLLLSLAAPTSAALQVGFYKGKCGFIDVESVVRDVVTAALEGDRTLVAALLRLHFHDCFVSGCDASLLLDGSNSEKEAPPNFSVRGYDLIDAVKIQVEKACPGVVSCADIIAMATRDAVNWAGGGRYSIETGRRDAFRPADIVDLPGPSISVSDSIAAFSKRNLNVTDMVYLLGGHTVGVSQCIFFKDRLYNYKDTGGPDPTIDPWFLNDLQSQCPQDSNDDNTVFLDQNRMSSFVVDKSFYRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRIQVLTGSEGEIRRTCVAVN 324
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 20565666 20569920 + CaPI482276_01g012270.1 Cam01g1227 118309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1227 324 Gene3D Peroxidase, domain 2 161 303 - -
Cam01g1227 324 ProSiteProfiles Plant heme peroxidase family profile. 28 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PANTHER PEROXIDASE 25-RELATED 25 320 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cam01g1227 324 Gene3D - 32 324 - -
Cam01g1227 324 FunFam Peroxidase 161 303 - -
Cam01g1227 324 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Cam01g1227 324 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1227 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cam01g1227 324 CDD secretory_peroxidase 29 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam01g1227 324 FunFam Peroxidase 32 159 - -
Cam01g1227 324 Pfam Peroxidase 47 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1227 Cam-Chr1:20565666 Cam09g1665 Cam-Chr9:28722119 1.30E-69 dispersed
Cam01g1227 Cam-Chr1:20565666 Cam02g0188 Cam-Chr2:2812730 2.60E-62 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1227 K00430 - csv:101210173 509.605