Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1298 ATGTTTGCTAAAAATCTCCACTTCTTCTTTTGGCTCTTACTTTCTCTTCTCATTCTTCACTCAACATCATCATCATCATCATCTATTTCTTCACAAGTGTATATAGTGTACTTAGGGCACAACCGTTTGAGTGATGATGCAACTTTGACCTCCAAATACCATCTTCATCTACTCTCAAAAGTGTTTGCAAGTGAAGAAGATGGTAAAAGAGCCATGTTGTATAGTTACAAGAAAAGTTTTTCGGGGTTCTCAGCAAAGCTTAATGCAAGCCAAGCAATAGCATTATCAAAGATGGAAGGAGTGATATCCGTATTCGAGAGTAAAACAATGCAACTTCACACAACAAGAAGTTGGGATTTCTTGGGCCTTCCTATAATTCCCTCATATACTAATAATATTAAACCATTATTTCCGCTTCGCCTTCCTAGCTATGGCAATCACGATGTTGTTGTTGGCATCTTCGATTCAGGTGTGTGGCCAGAATCTGAAAGTTTCAAGGAGAGTGAGGAGATGGGGAGACTTCCATGCAATTGGAAAGGTAAATGTGTGAAAGGATACAGATTCAACCCGGCCTTAGCCTGTAACCGCAAGCTAATTGGTGCTCGCTACTATATTAAAGGCTTCGAAGCCCAATACGGAGCCCTCAACACCACCGCCGGCAACCCCGAGTTCCGCTCCCCTCGAGACTTCTTAGGTCATGGAACTCACACCGCTTCCACTGCGGTGGGTGCGGTCGTGCATAATGTCACCTTCACTACATCTTCATCACTGGCTAAAGGCATTGCCCGAGGTGGGGCTCCCTGGGCCAGGCTGGCAGTGTACAAAGTGTGTTGGGGAAAGGACTACGAGGGCAAGTGCACCGATGCCGACGTCATGGCCGCTTTCGACGACGCTTTGCACGACGGAGTGGACGTCATCTCCGCCTCGTTTGGAGAGACGCCGCCGTTGGCTCCGTTGTTTGAGTCGGCCTCGGCTATTGGCTCATTCCATGCGATGCAGCGGGGAGTGAGCGTGGTGTTCTCTGCTGGGAATGATGGACCCCACCCTTCCCTTGTTCAAAATGTGTCTCCTTGGAGTATTTGTGTTGCTGCTTCTACTATGGATCGAACTTTTCCCACTCCAATACTTGTTCACAACCATTTCTCAATCATGGGGGAGAGCTTGATCACAAGAAATATAATAAACGTAAAGCTGGCAGATGCAATCAACTATTTCATAGATGGAATTTGTGAGAGAGACAACATAAGGAAAGGAGGGAAGTCAGGTAAAGGGAAAGTGGTAGTCTGTTTCTCAACCATTGGCCCAGTTTCCATAGGAACTGCACAAGAAGCAGTGAGAGCCATCAATGGCTCCGCTTTAATATTTGGTGCGCCCCCCACGACGGAGCTCCCAGATCTAGATCTCATCCCCACCGTTCGAATTGACATTGCTCAGGCGACTCAAATTCGAAACTTTCTTGCTGAATTACCCAGACTGCCGGCCGTCGAGATCGGCGTCGCGAGAAGTGTGATTGGGAAATCCGTAGCTCCTAGTGTGGCTTACTTTTCATCCAGAGGACCAAGCTCTATCTTACCTGACATTCTCAAGCCAGACATAAGTGCCCCAGGAGTGAACATATTGGCAGCATGGCCTCCGGAAACAGCTCCGACGGTGAGGCCAAGTGGAAGCGTTATTGAAGAAGAAGGTGTAAAATGGAATTTCCAGTCAGGGACTTCAATGTCATGTCCTCATATCTCTGGAGTAGTTGCCCTTATCAAATCTCTTCATCCCCATTGGTCACCTGCAGCCATTACATCTGCCATCATCACCACAGCCACGAAGAGGGACTCTAGTGGGAATAGCATCCTAGCAGGCGGATCCATGAAACCATCAGACCCATTTGACGTTGGTGCAGGTCAAGTGAACCCCTTAAAGGCCATAAATCCAGGTCTAATCTACGACATCACAACCAGCGATTACATTAGTTTCCTATGCAATATTGGGTATACAGAACAACAAATCAAGATGCTAATTCTCAACCCTTCTCCTCAATTTTGTTGTCCTCCTCAATCCACTACTACCATTAATATTGCAAATCTTAATTATCCGTCAATTACACTTACAAATCTTGGCTCTACCACCACACTCAAAAGAATTGTCCGCAATGTATCACTCAACAAAAACGCCATTTACTTTCTTAGGATTCTTCCTCCCAAGGGAGTCCGAGTACAAGTCTGGCCAAGGATCCTGCTTTTCTCTTGCTTTAGGCAACACCTTTCTTACTATATTACCATAACTCCGCTCAAGAAATCTCGAGGTAGATATGATTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTCACAAGTCCTCTCGTTGTACATCTTGCCACTTCTACATAA 2385 46.04 MFAKNLHFFFWLLLSLLILHSTSSSSSSISSQVYIVYLGHNRLSDDATLTSKYHLHLLSKVFASEEDGKRAMLYSYKKSFSGFSAKLNASQAIALSKMEGVISVFESKTMQLHTTRSWDFLGLPIIPSYTNNIKPLFPLRLPSYGNHDVVVGIFDSGVWPESESFKESEEMGRLPCNWKGKCVKGYRFNPALACNRKLIGARYYIKGFEAQYGALNTTAGNPEFRSPRDFLGHGTHTASTAVGAVVHNVTFTTSSSLAKGIARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGETPPLAPLFESASAIGSFHAMQRGVSVVFSAGNDGPHPSLVQNVSPWSICVAASTMDRTFPTPILVHNHFSIMGESLITRNIINVKLADAINYFIDGICERDNIRKGGKSGKGKVVVCFSTIGPVSIGTAQEAVRAINGSALIFGAPPTTELPDLDLIPTVRIDIAQATQIRNFLAELPRLPAVEIGVARSVIGKSVAPSVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGSVIEEEGVKWNFQSGTSMSCPHISGVVALIKSLHPHWSPAAITSAIITTATKRDSSGNSILAGGSMKPSDPFDVGAGQVNPLKAINPGLIYDITTSDYISFLCNIGYTEQQIKMLILNPSPQFCCPPQSTTTINIANLNYPSITLTNLGSTTTLKRIVRNVSLNKNAIYFLRILPPKGVRVQVWPRILLFSCFRQHLSYYITITPLKKSRGRYDFGEIQWFNRFHTVTSPLVVHLATST 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24615135 24624228 + CaPI482276_01g012980.1 Cam01g1298 118380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1298 794 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Cam01g1298 794 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 113 IPR037045 -
Cam01g1298 794 ProSiteProfiles Serine proteases, subtilase domain profile. 117 640 - -
Cam01g1298 794 FunFam Subtilisin-like protease SBT1.5 148 403 - -
Cam01g1298 794 SUPERFAMILY Subtilisin-like 112 644 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1298 794 Gene3D Peptidase S8/S53 domain 148 653 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1298 794 Gene3D - 368 504 - -
Cam01g1298 794 CDD Peptidases_S8_3 111 606 IPR034197 -
Cam01g1298 794 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Cam01g1298 794 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Cam01g1298 794 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Cam01g1298 794 Pfam Peptidase inhibitor I9 33 113 IPR010259 -
Cam01g1298 794 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 786 IPR045051 -
Cam01g1298 794 Gene3D - 657 791 - -
Cam01g1298 794 Pfam Subtilase family 147 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam01g1298 794 FunFam Subtilisin-like protease SBT5.3 22 113 - -
Cam01g1298 794 Pfam Fibronectin type-III domain 692 788 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1298 Cam-Chr1:24615135 Cam07g0835 Cam-Chr7:20903236 4.20E-159 dispersed
Cam01g1298 Cam-Chr1:24615135 Cam02g0319 Cam-Chr2:3945034 3.30E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1298 - - - 0.0