Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1314 ATGTTGAACAAAGCGACGGAGAAGGGTGTCGAGGGGCTGTTTTCGGAAGATGCAAATGCTCAAGGAGATTCAAATCCGAATCCTCTTTCGAAAGTGTTGTTTGAGCAAGTGAGCTGGGATGGGTTAGTAAGCAATGGTGATGTCGCTCAAGTGAAGGTGCCGAAGGCTGTGGATGGAGTTGCTGACACAAAAGTGATGAATAAAACGGGCTTTGAGAATCAGAAGGCTCCGCCTTTTGATAGAGGCTATTCCTCAGGTCTTGCTATTGGGTCTTGCTCCTACTCCTATCTGATGGTAAGCACGGTTGGCAATATGAGCCAAGTAAGTCCTCTTTCTTTGGTTTCTTATCCTCCGTCCGAGTTGGGGTTGCTTGAGAGTGAGGCTGGTGTCATTCCGTTCAATTTGCTGTTTTCGTTTCCTTGTAATGTGGGTGGGGGAGATGGTAGGTTTGTTTTGAGAGTTTCTATCACCCTTTGGTCTTTCTATAACCCTTTTCTCATCCGAGGTTATAGGTCAAGGGGTGATGGTATGCTTCTTACCAACGGGGGTGTTCTTGGAGCTCCTTTAGCTACTCCTAGTTCTCTTGATTCTCAGACCTCATGGTCGAGTATTGGCATTGAAAACCCGGGGTGGGCCGCTCTACCCTTGGTGGGAATCAAACAACTAAAGGTGATTGATGACATAATTTCTCGTGGATGCTTGCCAATGATAGTGGGTGGAACAAATTATTATATACAGGCTCTTGTTAGCCCGTTTCTTCTGGATGATTCTGCCGAAAATGTTGGTGGAAGTTGCTCCATTTATCCTGGAGATGAAGAGCTGGGTATTGAGTTGAATGAGGGAAGAGATGGTTTGAAGTATGACCATAACCATCTTAAAGAGATTGATCCAGTTTCGGCTAACAGAATCCATCCTAATAACCACAGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGTGTTCTTCCCAGCACACTTTTTCAAGGAACGGCTAATGAGAATTGGGGTCAAGCTGATAGTTTCAGATATGATTGCTGCTTGATATGTGTCGATGCTTCTGTTCCACAACTTGATGGACATGTTGATTCTAGAGTTGATAGCATGATGGCTGCTGGATTACTTGATGAGGTTTATGACATTTACAATCCAAGTGCAAACTATACTAAAGGAGTGCGTCAAGCTATTGGTGTTCGGGAGTTTGAAGAGTTTTTGAGATATTATGTACCTAAAGGTAGATGTGAAAAAGATAGTGCTGGCCTTAGCCCAAAAAAAATAATGGAGTGCAATGAGATTGAGAATATAAGGTCAATCCTGAATTCACCAAGTAATAGCGAACCCAGTTTGCTACTGAAAGAAGCCATAGATAATGTAAAGTTGAATACTAGAAGACTGGTTCGTCGTCAGAGGAGGCAGCTAAAGAGACTGGAGACTTTGTTTGGATGGAAGATCCACTATGTTGATTCCACGGAATATATAACATGCAAAGTGGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCAGTCCAGATAATTAGGTCTTTCCTTAAAGATGGTTCGGGGACTGAAACAATAAACCCGCATAGTTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAATATATATGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACACAATCAAGGTCGCACACATCGAAAACGAATTTATCGGCTTAAGAAGAAGTGTGAAGGGCTTTCCTTGCTGCAACAGAAACTACCTCTTCAAGAATAA 1785 43.03 MLNKATEKGVEGLFSEDANAQGDSNPNPLSKVLFEQVSWDGLVSNGDVAQVKVPKAVDGVADTKVMNKTGFENQKAPPFDRGYSSGLAIGSCSYSYLMVSTVGNMSQVSPLSLVSYPPSELGLLESEAGVIPFNLLFSFPCNVGGGDGRFVLRVSITLWSFYNPFLIRGYRSRGDGMLLTNGGVLGAPLATPSSLDSQTSWSSIGIENPGWAALPLVGIKQLKVIDDIISRGCLPMIVGGTNYYIQALVSPFLLDDSAENVGGSCSIYPGDEELGIELNEGRDGLKYDHNHLKEIDPVSANRIHPNNHRKINQYLSLYYRTGVLPSTLFQGTANENWGQADSFRYDCCLICVDASVPQLDGHVDSRVDSMMAAGLLDEVYDIYNPSANYTKGVRQAIGVREFEEFLRYYVPKGRCEKDSAGLSPKKIMECNEIENIRSILNSPSNSEPSLLLKEAIDNVKLNTRRLVRRQRRQLKRLETLFGWKIHYVDSTEYITCKVEDSWTAQVVEPAVQIIRSFLKDGSGTETINPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRIYRLKKKCEGLSLLQQKLPLQE 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24919199 24935338 + CaPI482276_01g013140.1 Cam01g1314 118396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1314 594 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 222 530 IPR039657 GO:0005739(PANTHER)|GO:0006400(PANTHER)|GO:0052381(PANTHER)
Cam01g1314 594 Gene3D - 272 332 - -
Cam01g1314 594 FunFam tRNA dimethylallyltransferase 539 581 - -
Cam01g1314 594 Gene3D Classic Zinc Finger 543 582 - -
Cam01g1314 594 Gene3D - 217 542 IPR027417 -
Cam01g1314 594 Pfam IPP transferase 222 475 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0634 Cam-Chr1:6921542 Cam01g1314 Cam-Chr1:24919199 2.70E-57 dispersed
Cam01g1314 Cam-Chr1:24919199 Cam08g0935 Cam-Chr8:14565032 3.10E-21 dispersed
Cam01g1314 Cam-Chr1:24919199 Cam06g0587 Cam-Chr6:7948733 8.10E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1314 K00791 - csv:101202758 652.514