Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1344 ATGGCGCTCTCTCTATCCCTACAACTCATCCGTTTCCCTCCTCAACCATTATCCTCATCCTCTCAACATCTTCTCATCTCTGACCTCGCCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGGCTCCGTCGCGGAGCTACACGATGAAGTTATCTTCCAGAACCAAGTGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGCGAATCGGAAGCGTTGGTGTCCGATGTGGACGGAGGGGGAGATCTTGAGGATGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAAAAATTCTGCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATCCGAGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGATGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGATCATTGAGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTGCTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACATTGGTTGAATTAGGGTCCAGGGCAGGGGCTCTTAGACAAATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGCGGATGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCCGTAAATTTGAGCTCGCGGCGACTAGAGGTTAGCAGAGTGGAGTTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTAGACAGGAGAATCCTGTAGCTAAGTACTTGTTCAGGTCATTCAACACTCAATCTTGGAGGGGCTGCTATATCCCAGTGATGAGGATGCAAATTGTGAAGGCTGCATATATTATTAGGCCATGCGCCAATATTGGCACAATCACTCAGTTTGGTTTATGA 1467 45.26 MALSLSLQLIRFPPQPLSSSSQHLLISDLASVSRFFRSPCLSSLAPSRSYTMKLSSRTKCFSMSTEEEQWSESEALVSDVDGGGDLEDDIDIGVQEDSSVATAASAQKNSASSPSDYLSLAIREQVYEVLEVKDDGTVSTRKVNRRQLLKSSGLRPRDIRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIRQENPVAKYLFRSFNTQSWRGCYIPVMRMQIVKAAYIIRPCANIGTITQFGL 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26089090 26098503 + CaPI482276_01g013440.1 Cam01g1344 118426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1344 488 Gene3D Magnesium transport protein CorA, transmembrane region 206 387 - -
Cam01g1344 488 CDD Mrs2_Mfm1p-like 129 436 IPR039204 -
Cam01g1344 488 Gene3D - 119 203 - -
Cam01g1344 488 Coils Coil 336 356 - -
Cam01g1344 488 FunFam Magnesium transporter MRS2-11, chloroplastic 205 387 - -
Cam01g1344 488 FunFam Magnesium transporter MRS2-11, chloroplastic 122 203 - -
Cam01g1344 488 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 102 436 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cam01g1344 488 Pfam Magnesium transporter MRS2-like 132 386 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1344 K16075 - csv:101219314 722.62