Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g1406 | ATGGGATCAACAACAACAAACAGCCATTATTATAGCCCTTGTGCAGCTTGCAAATTCCTAAGAAGAAAATGCTTAGAAGGATGTGTTTTTGCACCCTATTTTCCACCTGAAGAACCCCAAAAATTTGCCAATGTCCACAAGGTATTCGGAGCGAGTAACGTTGCGAAGCTCCTGAACGACGTTCTTCCTCATCAACGACAAGATGCCGTCGTTTCGCTCGCCTATGAAGCCGAGGCAAGAATCAGAGATCCTGTTTATGGCTGTGTTGGAGCAATTTCTTTCCTCCAAAAACAGGTCCAAAGGCTCCAAAAAGAACTTGATGCTGCTAAAGCTTGCCTTTTTCTCTACTCTTGCACTGATTTCTCAACTCCCCTTTTGCCTCCTCACCCTCAGATTATAACTACTCCTCATCCACTGATTTGGAATAATAATCTTAATCTTAATAATAATAATCATGATATTACTAATTCTTCTATGTATTTTAATGGAGGAATTTGA | 498 | 40.36 | MGSTTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLYSCTDFSTPLLPPHPQIITTPHPLIWNNNLNLNNNNHDITNSSMYFNGGI | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 27604745 | 27605242 | + | CaPI482276_01g014060.1 | Cam01g1406 | 118488 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g1406 | 165 | Coils | Coil | 92 | 112 | - | - | |
Cam01g1406 | 165 | ProSiteProfiles | LOB domain profile. | 12 | 113 | IPR004883 | - | |
Cam01g1406 | 165 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 118 | - | - | |
Cam01g1406 | 165 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 110 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g1406 | Cam-Chr1:27604745 | Cam11g1136 | Cam-Chr11:22193914 | 9.70E-42 | dispersed | |
Cam01g1406 | Cam-Chr1:27604745 | Cam10g1288 | Cam-Chr10:26329080 | 3.70E-49 | wgd | |
Cam01g1406 | Cam-Chr1:27604745 | Cam06g1875 | Cam-Chr6:29809294 | 6.10E-52 | wgd | |
Cam01g1406 | Cam-Chr1:27604745 | Cam09g1974 | Cam-Chr9:34402756 | 1.50E-45 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51265 | PF03195 | LOB | 4.40E-42 | No_clan | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g1406 | - | - | - | 0.0 |