Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1427 ATGCAGAGCTCTGCGGTCACCTTCTCTCCTTCTCTTCCTCTTCTCAAGCCTCGCAGGCCTCATACTTCATCCTTCAGCTCTGGATGTAACTCAATTCGGTTATCTTCTTCGTCATCCTCAAATTCCAGAGATCTCGGAGACCTGAACAATGTTGGCCTCCCTTCCTCTTGGCCCCGCCGATCTTGGACTCTGTCTTCGTCTCCTTTTTCCTCCTCGAAACTCCGCCCATGGACCGGTGTGCCCTCGCTTGCTTCGGATTCCGATGCGAGTCATTTCAAGGTTCAGGCTACTGCGGTGCCGGATAGCTCAGGGGAGGCCGCGAGTGCTGGCGGAAGCCTAATGAAAACGTTGGAGCTCGGGTTGTTGTTTGGCCTCTGGTACCTTTTCAACATCTACTTTAACATCTACAACAAGCAGGTTCTCAAGGTGTATCCGTTTCCTGTGACTGTCACTGCAGTTCAATTTGCCGTAGGCACTGTACTTGTTCTTCTCATGTGGGGACTTAATCTCTACAAAAGACCTAAGATTAGTGGTGCTCAGCTTGCTGCTATTCTGCCACTGGCATTTGTTCACACATTGGGAAATCTTTTCACAAATATGAGTCTTGGGAAAGTGGCGGTATCGTTCACTCACACAATCAAAGCCATGGAGCCATTTTTTTCAGTTGTCCTGTCAGCAATGTTTCTTGGAGAGACTCCTACTCCCTGGGTTGTTGCGTCCCTTCTGCCAATCGTAGGTGGTGTTGCATTGGCATCTGCCACTGAGGCCTCCTTCAACTGGGCTGGGTTTTGGAGCGCAATGGCATCCAATGTGACTAATCAATCTCGTAATGTCCTTAGCAAAAAGGTCATGGTGAAAAAAGAGGACTCAATTGACAACATCACCCTCTTTTCAATTATAACAGTCATGTCCTTTTTCTTACTATCCCCTGTGGCCATCTTCATGGAAGGTGTCAAGTTCACTCCTGCATACCTTCAATCAGCTGGATTGAACATGAATCAACTATACATTAGGTCTCTTCTTGCTGCCCTTTGTTTCCATGCTTACCAACAGGTTTCTTACATGATATTGCAAAGAGTATCGCCTGTTACCCACTCGGTCGGCAATTGTGTAAAGCGTGTTGTGGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCTGTTTCTCCAATCAACTCTCTTGGCACTGGAATAGCTCTTGCTGGGGTTTTCCTTTATTCGAGGGTTAAGCGCATCAAAGCTAAGCCGAAGACAGCTTAA 1260 47.38 MQSSAVTFSPSLPLLKPRRPHTSSFSSGCNSIRLSSSSSSNSRDLGDLNNVGLPSSWPRRSWTLSSSPFSSSKLRPWTGVPSLASDSDASHFKVQATAVPDSSGEAASAGGSLMKTLELGLLFGLWYLFNIYFNIYNKQVLKVYPFPVTVTAVQFAVGTVLVLLMWGLNLYKRPKISGAQLAAILPLAFVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGETPTPWVVASLLPIVGGVALASATEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKKEDSIDNITLFSIITVMSFFLLSPVAIFMEGVKFTPAYLQSAGLNMNQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSLGTGIALAGVFLYSRVKRIKAKPKTA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27793135 27796291 + CaPI482276_01g014270.1 Cam01g1427 118509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1427 419 PANTHER SOLUTE CARRIER FAMILY 35 111 408 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cam01g1427 419 MobiDBLite consensus disorder prediction 1 47 - -
Cam01g1427 419 MobiDBLite consensus disorder prediction 20 47 - -
Cam01g1427 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 162 252 - -
Cam01g1427 419 Pfam Triose-phosphate Transporter family 118 407 IPR004853 -
Cam01g1427 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 331 410 - -
Cam01g1427 419 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 117 417 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1427 Cam-Chr1:27793135 Cam05g0285 Cam-Chr5:2740126 4.30E-62 dispersed
Cam01g1427 Cam-Chr1:27793135 Cam09g1964 Cam-Chr9:34307235 3.10E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1427 K15283 - csv:101203848 712.22