Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g1435 | ATGAGGAATTTAAACTGGTTTAAGCCAATTTCGATTAATGGGAAGCCTGGGAGGAGGCTTTCACTAGGAGAATACCAGCGTGCTGTGTCGTGGTCTAAGTATTTGGTGTCTTCAGGAGCAGAGATAAAGGGAGAGGGAGAAGAGGAATGGAGTGCTGACATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGGCACAGTAGGATTTACAGAGGTGTGTATAAACAGAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGATGAAAATTTGGCTAACTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAACCTCCAGTGTTTTGTATTATCACGGAGTATATGACAGGAGGTTCGTTAAGAAAATATCTCCATCAACAAGAGCCACATTCCGTTCCGCTGAACTTGGTTCTGAAACTAGCCCTCGAAATCTCACGTGGGATGCAGTACCTTCATTCTCAGGGAATACTCCACAGAGATCTCAAATCAGAAAATCTCTTACTCGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCTTAGAATCTCAATGTGGAAGTGCGAAGGGATTCACCGGAACTTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACACCACACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTATGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGAATGCAAGACCACCGCTGCCTTCTGCTTGCCCGCAGGCATTTCGTCATCTGATCAAGAGATGCTGGTCGAGAAATCCCAACAAGCGACCGCACTTTGATGAGATCGTTTCAATTTTGGAAACTTATGCGGAATGTTACAATGAAGATCCAGATTTTTTTGGTCATTACGTCCCCTCGTCTAGATATACTGCTTTGCAATGCTTACCAAAATGGGTTGACCAAGAAGAAAAGGAGGTTCAGCAAGATGGGAAAGCTGAAGACCCATCTCCAACAGCAGTTGCATCTAGTGCGAGTCAAGCTACAAGCTCAACCCAAACTTTACAGCCTTCAGCTTCTGCACCCACTGCACCCCTCACGATTGTTTCATCTACGGGTACATTGAAGGGGTCTGAATTTCATTGGTCTGGTGTACTTCTAGCTGTAGGACTGCTGTCAATTTCAGGTGCTGTAACAGCATTCATAATTAAGAACAAAATAATTCCAAGAATGAAATCCTGGATACGCATGTTGGTAAACGATGGACATGAAGAGATTGTAAAAAGAGAGAGTTCCATTTCAAGTTTGGGAGAAGAAGCAGCTTCAGAAGCGGCAATTGATCTAGCAAGAGCAAGCCAGGATATGTTGAACTCAAAATATCAAGCTTTCGATGTTGAAGCACCTTCAGAAGTGGCAATTGATCTAGCAAGAGCAAGCCAGGATATTTTGAAAGGCGATTCAGAACGAACAAATTATTCTGGCGAAACAGCATCTGGTAACAACAATCCTTTACACAAATTGTAG | 1596 | 43.05 | MRNLNWFKPISINGKPGRRLSLGEYQRAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEEDENLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMTGGSLRKYLHQQEPHSVPLNLVLKLALEISRGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPQAFRHLIKRCWSRNPNKRPHFDEIVSILETYAECYNEDPDFFGHYVPSSRYTALQCLPKWVDQEEKEVQQDGKAEDPSPTAVASSASQATSSTQTLQPSASAPTAPLTIVSSTGTLKGSEFHWSGVLLAVGLLSISGAVTAFIIKNKIIPRMKSWIRMLVNDGHEEIVKRESSISSLGEEAASEAAIDLARASQDMLNSKYQAFDVEAPSEVAIDLARASQDILKGDSERTNYSGETASGNNNPLHKL | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 27902183 | 27908322 | - | CaPI482276_01g014350.1 | Cam01g1435 | 118517 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g1435 | 531 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 139 | - | - | |
Cam01g1435 | 531 | FunFam | Serine/threonine-protein kinase isoform 1 | 47 | 139 | - | - | |
Cam01g1435 | 531 | MobiDBLite | consensus disorder prediction | 510 | 531 | - | - | |
Cam01g1435 | 531 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 311 | IPR011009 | - | |
Cam01g1435 | 531 | CDD | STKc_MAP3K-like | 66 | 311 | - | - | |
Cam01g1435 | 531 | PRINTS | Tyrosine kinase catalytic domain signature | 282 | 304 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | PRINTS | Tyrosine kinase catalytic domain signature | 135 | 148 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | PRINTS | Tyrosine kinase catalytic domain signature | 173 | 191 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | PRINTS | Tyrosine kinase catalytic domain signature | 219 | 229 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 260 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | ProSiteProfiles | Protein kinase domain profile. | 57 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | MobiDBLite | consensus disorder prediction | 363 | 387 | - | - | |
Cam01g1435 | 531 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 359 | - | - | |
Cam01g1435 | 531 | SMART | serkin_6 | 57 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | MobiDBLite | consensus disorder prediction | 348 | 387 | - | - | |
Cam01g1435 | 531 | Pfam | Peroxisomal membrane protein PEX14-like, central | 403 | 484 | IPR054154 | - | |
Cam01g1435 | 531 | Pfam | Protein tyrosine and serine/threonine kinase | 63 | 311 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g1435 | 531 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 55 | 312 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g1435 | Cam-Chr1:27902183 | Cam01g2212 | Cam-Chr1:34632598 | 4.40E-112 | dispersed | |
Cam02g0405 | Cam-Chr2:4785782 | Cam01g1435 | Cam-Chr1:27902183 | 1.80E-66 | transposed | |
Cam05g0554 | Cam-Chr5:4914326 | Cam01g1435 | Cam-Chr1:27902183 | 7.90E-18 | transposed | |
Cam05g1704 | Cam-Chr5:25378121 | Cam01g1435 | Cam-Chr1:27902183 | 1.30E-67 | transposed | |
Cam11g1142 | Cam-Chr11:22404977 | Cam01g1435 | Cam-Chr1:27902183 | 2.30E-79 | transposed | |
Cam01g1435 | Cam-Chr1:27902183 | Cam10g1252 | Cam-Chr10:25943712 | 5.90E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84876 | PF07714 | PK_Tyr_Ser-Thr | 2.10E-65 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g1435 | - | - | - | 0.0 |