Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1578 ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGAGCTGGGTCAGCTGACCTGAACTCCAAACTCACCGCCGTCCCTTCTGTTGCGTCTCCTGGGGTTGTGGGATACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAATAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCACCCTCTTTGCTGCTGCTGCGGCTGCCTCCAACTCCTCTGCTAATGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGAGTTGAATGACAAGAAACGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 516 48.45 MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29267230 29268394 + CaPI482276_01g015780.1 Cam01g1578 118660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1578 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER)
Cam01g1578 171 FunFam Photosystem I reaction center subunit N 87 171 - -
Cam01g1578 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 171 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)
Cam01g1578 171 Gene3D - 87 171 IPR044907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1578 K02701 - csv:101204396 305.834