Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1630 ATGAGGTCATCGGCGTCGGAAGAAGAGATAATGGTGAGTCTATTCCAAGCAGATCAAGAGGCGGCCGCCGTGAACGCCGCCGCTATCACCACCAATTTCATATCTTTTCCAGAAGCCAACAACAACAACAACAACAATAACGTTGTTGTTCAACAATCCTTGAAACCCTTTTCCTTCAGTACTCAACACTATTTCTGTCAACAACAACAACAATCCCTTTTCCCTTTTTTCTTTCCTTCGACCACTGCTCCCTCTAATCTCCTTTCCTCTCACAACACACCCTCTTCTTCCTCTCTCTGGGATGAAAAGGAGAGGTTTATGAGAGGGAGAAATAATGGGATTGGAAATTATGTTGGTGACGACGATAACGACGATGACTGTAAGCCGCGGTTGAGGGTGTCGACGATGAAGATGAAGAGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCAAGATTCAGCTTCAAGACCATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTGAAGAACACCCTCCATCCAAGAAGTTACTATCGATGCACCGAAGAGAATTGTAAGGTAAAGAAACGAGTTGAAAGATTAGCCGATGATCCAAGAATGGTGATAACAACATATGAAGGAAGACATGCTCATTCACCTTCAGATAATAATTTAGAAGACTCTATCATGGGTCACTTACCCTCCTCCCACCTCAGTAATTTCCTCTGCTAG 738 43.77 MRSSASEEEIMVSLFQADQEAAAVNAAAITTNFISFPEANNNNNNNNVVVQQSLKPFSFSTQHYFCQQQQQSLFPFFFPSTTAPSNLLSSHNTPSSSSLWDEKERFMRGRNNGIGNYVGDDDNDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLADDPRMVITTYEGRHAHSPSDNNLEDSIMGHLPSSHLSNFLC 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29877258 29879601 - CaPI482276_01g016300.1 Cam01g1630 118712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1630 245 FunFam WRKY transcription factor 57 149 223 - -
Cam01g1630 245 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 225 IPR044810 GO:0003700(InterPro)
Cam01g1630 245 SMART WRKY_cls 163 222 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g1630 245 Gene3D WRKY domain 138 223 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g1630 245 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g1630 245 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam01g1630 245 SUPERFAMILY WRKY DNA-binding domain 155 222 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1630 Cam-Chr1:29877258 Cam02g0105 Cam-Chr2:2195613 1.30E-45 dispersed
Cam01g1630 Cam-Chr1:29877258 Cam01g1637 Cam-Chr1:29974324 3.10E-20 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51281 PF03106 WRKY 4.40E-25 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1630 - - - 0.0