Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1645 ATGGCTTCCAATGATTTTTCAGCCATTCTTTTTGCCTTGATAATTCCCTTTCTTTTCATCATTTTCTCTCGTGTTTGGAGGTGGAATTTCCATGGAGTCGTTCCTTGGAACTGGCCAATCCTGGGTATGACGCCCACTGTTGTTGCTCATATCCATCGACCTCATGATCGTATTACTGAAGTCTTACAAGAAGTTGGTTCCACTTTCTTCTTCAAAGGCATTTGGTTTTCAGGTATGGACTTCCTTTTCACAGTTGACCCTTCAAATATCCACCATATTTTGAGTGCCAATTTCAACCGATATCCAAAAGGCCCTGATTTCAAGTATATTTTTGATGTTTTGGGAGATGGGATTTTCAACTCTGATTCAGATGTTTGGAAGAATCAACGTAAAACCGCTCATTCTTTGGTACACCATGAGAATTTTCTTCAATTCTTGGAGAAAATTACATTGAAGAAAGTGAAGGAAGGGCTGGTTCCGGTGCTTGAAACTGTTTGTGAAAATGGGTCGGTGTTGGATTTGCAAGATTTGTTTCAGAGATTCTCCTTTGATTCAACTTGTATGTTGGTCACTGGCTTCGACCTCCATAGTTTATCTCTTGAATTCCCTCAAGTTCCTTTCTCCAAAGCCATGGATGATGCAGAGGAAGTGATTTTTCTTCGACATATTTTCCCTAAAAGAATATGGGAATTTCAGAAGAAACTCAAAATTGGACAACCCAAGAGGCTGAAACAAGCTTGGGAAATCATAGATGAAACCATCGCCAATTTGATAGCCTCCAAAAGGGAAAGCTTGAGAAATCAGGTGAAAGAAGAGGGAGATCAGCAAGGAGGAGGAGTTGATTTGATCACATCATATATTACAAATACAAACAAAGATGATAAATTTTTGAGAGATACAGTCTTAAATTTTATGATTGCTGGTAGAGACACTCTAAGTTCTGCTCTCTCCTGGTTTTTCTTTTGTCTTTCAAACAATCCAAACATCATAACAAAGATTAGAGAAGAGTTCAAAACAACGATTCCAACGAATGAAGCTCGAGATCAATGGCGGATATTTTCGATTGAAGAGGTGGATAAGTTAGTTTACTTCCATGGAACTTTGTGTGAAACTCTTAGACTATATCCTCCGGTCCCACTACAACACAAGGTGTCAGTACAACATGATATCCTCCCAAGTGGTCATCACATAAATCCCAAAACAAAGATTTTGTTTTCTTTATATGCATTGGGAAGAATGAGTGATGTGTGGGGGAAAGATTGCATGAAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAGGAATCAAACATGTGCCATCTTACAAATTTTTGGCCTTTAATGCTGGGCCAAGAACTTGCTTGGGAAAACAAGTAGCTTTCGTTGAGTTGAAAATAGTTGCAGCTGCTATTATTCACAACTATGATATTATTCAACAAATAGAGCATGAGGTTGTTCCAAATGCTTCCATTATTCTTCATATGAAGCATGGATTCAAGGTTAGGGTTACAAAGAGGTGGACTTGA 1527 38.64 MASNDFSAILFALIIPFLFIIFSRVWRWNFHGVVPWNWPILGMTPTVVAHIHRPHDRITEVLQEVGSTFFFKGIWFSGMDFLFTVDPSNIHHILSANFNRYPKGPDFKYIFDVLGDGIFNSDSDVWKNQRKTAHSLVHHENFLQFLEKITLKKVKEGLVPVLETVCENGSVLDLQDLFQRFSFDSTCMLVTGFDLHSLSLEFPQVPFSKAMDDAEEVIFLRHIFPKRIWEFQKKLKIGQPKRLKQAWEIIDETIANLIASKRESLRNQVKEEGDQQGGGVDLITSYITNTNKDDKFLRDTVLNFMIAGRDTLSSALSWFFFCLSNNPNIITKIREEFKTTIPTNEARDQWRIFSIEEVDKLVYFHGTLCETLRLYPPVPLQHKVSVQHDILPSGHHINPKTKILFSLYALGRMSDVWGKDCMKFKPERWISEKGGIKHVPSYKFLAFNAGPRTCLGKQVAFVELKIVAAAIIHNYDIIQQIEHEVVPNASIILHMKHGFKVRVTKRWT 508
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 30046111 30047637 + CaPI482276_01g016450.1 Cam01g1645 118727
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1645 508 PANTHER CYTOCHROME P450 20 499 - -
Cam01g1645 508 Gene3D Cytochrome P450 33 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS E-class P450 group IV signature 298 324 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS E-class P450 group IV signature 438 454 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS E-class P450 group IV signature 454 472 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS E-class P450 group IV signature 361 377 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS E-class P450 group IV signature 412 430 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam01g1645 508 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam01g1645 508 CDD CYP86A 69 499 - -
Cam01g1645 508 Pfam Cytochrome P450 36 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1643 Cam-Chr1:30006871 Cam01g1645 Cam-Chr1:30046111 5.50E-184 dispersed
Cam01g1645 Cam-Chr1:30046111 Cam01g1647 Cam-Chr1:30072272 2.00E-247 dispersed
Cam01g1644 Cam-Chr1:30021152 Cam01g1645 Cam-Chr1:30046111 6.30E-249 tandem
Cam01g1645 Cam-Chr1:30046111 Cam01g1646 Cam-Chr1:30057466 6.70E-275 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1645 - - - 0.0