Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam01g1645 | ATGGCTTCCAATGATTTTTCAGCCATTCTTTTTGCCTTGATAATTCCCTTTCTTTTCATCATTTTCTCTCGTGTTTGGAGGTGGAATTTCCATGGAGTCGTTCCTTGGAACTGGCCAATCCTGGGTATGACGCCCACTGTTGTTGCTCATATCCATCGACCTCATGATCGTATTACTGAAGTCTTACAAGAAGTTGGTTCCACTTTCTTCTTCAAAGGCATTTGGTTTTCAGGTATGGACTTCCTTTTCACAGTTGACCCTTCAAATATCCACCATATTTTGAGTGCCAATTTCAACCGATATCCAAAAGGCCCTGATTTCAAGTATATTTTTGATGTTTTGGGAGATGGGATTTTCAACTCTGATTCAGATGTTTGGAAGAATCAACGTAAAACCGCTCATTCTTTGGTACACCATGAGAATTTTCTTCAATTCTTGGAGAAAATTACATTGAAGAAAGTGAAGGAAGGGCTGGTTCCGGTGCTTGAAACTGTTTGTGAAAATGGGTCGGTGTTGGATTTGCAAGATTTGTTTCAGAGATTCTCCTTTGATTCAACTTGTATGTTGGTCACTGGCTTCGACCTCCATAGTTTATCTCTTGAATTCCCTCAAGTTCCTTTCTCCAAAGCCATGGATGATGCAGAGGAAGTGATTTTTCTTCGACATATTTTCCCTAAAAGAATATGGGAATTTCAGAAGAAACTCAAAATTGGACAACCCAAGAGGCTGAAACAAGCTTGGGAAATCATAGATGAAACCATCGCCAATTTGATAGCCTCCAAAAGGGAAAGCTTGAGAAATCAGGTGAAAGAAGAGGGAGATCAGCAAGGAGGAGGAGTTGATTTGATCACATCATATATTACAAATACAAACAAAGATGATAAATTTTTGAGAGATACAGTCTTAAATTTTATGATTGCTGGTAGAGACACTCTAAGTTCTGCTCTCTCCTGGTTTTTCTTTTGTCTTTCAAACAATCCAAACATCATAACAAAGATTAGAGAAGAGTTCAAAACAACGATTCCAACGAATGAAGCTCGAGATCAATGGCGGATATTTTCGATTGAAGAGGTGGATAAGTTAGTTTACTTCCATGGAACTTTGTGTGAAACTCTTAGACTATATCCTCCGGTCCCACTACAACACAAGGTGTCAGTACAACATGATATCCTCCCAAGTGGTCATCACATAAATCCCAAAACAAAGATTTTGTTTTCTTTATATGCATTGGGAAGAATGAGTGATGTGTGGGGGAAAGATTGCATGAAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAGGAATCAAACATGTGCCATCTTACAAATTTTTGGCCTTTAATGCTGGGCCAAGAACTTGCTTGGGAAAACAAGTAGCTTTCGTTGAGTTGAAAATAGTTGCAGCTGCTATTATTCACAACTATGATATTATTCAACAAATAGAGCATGAGGTTGTTCCAAATGCTTCCATTATTCTTCATATGAAGCATGGATTCAAGGTTAGGGTTACAAAGAGGTGGACTTGA | 1527 | 38.64 | MASNDFSAILFALIIPFLFIIFSRVWRWNFHGVVPWNWPILGMTPTVVAHIHRPHDRITEVLQEVGSTFFFKGIWFSGMDFLFTVDPSNIHHILSANFNRYPKGPDFKYIFDVLGDGIFNSDSDVWKNQRKTAHSLVHHENFLQFLEKITLKKVKEGLVPVLETVCENGSVLDLQDLFQRFSFDSTCMLVTGFDLHSLSLEFPQVPFSKAMDDAEEVIFLRHIFPKRIWEFQKKLKIGQPKRLKQAWEIIDETIANLIASKRESLRNQVKEEGDQQGGGVDLITSYITNTNKDDKFLRDTVLNFMIAGRDTLSSALSWFFFCLSNNPNIITKIREEFKTTIPTNEARDQWRIFSIEEVDKLVYFHGTLCETLRLYPPVPLQHKVSVQHDILPSGHHINPKTKILFSLYALGRMSDVWGKDCMKFKPERWISEKGGIKHVPSYKFLAFNAGPRTCLGKQVAFVELKIVAAAIIHNYDIIQQIEHEVVPNASIILHMKHGFKVRVTKRWT | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 30046111 | 30047637 | + | CaPI482276_01g016450.1 | Cam01g1645 | 118727 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam01g1645 | 508 | PANTHER | CYTOCHROME P450 | 20 | 499 | - | - | |
| Cam01g1645 | 508 | Gene3D | Cytochrome P450 | 33 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | E-class P450 group IV signature | 298 | 324 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | E-class P450 group IV signature | 438 | 454 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | E-class P450 group IV signature | 454 | 472 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | E-class P450 group IV signature | 361 | 377 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | E-class P450 group IV signature | 412 | 430 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | P450 superfamily signature | 454 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam01g1645 | 508 | SUPERFAMILY | Cytochrome P450 | 35 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g1645 | 508 | CDD | CYP86A | 69 | 499 | - | - | |
| Cam01g1645 | 508 | Pfam | Cytochrome P450 | 36 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g1643 | Cam-Chr1:30006871 | Cam01g1645 | Cam-Chr1:30046111 | 5.50E-184 | dispersed | |
| Cam01g1645 | Cam-Chr1:30046111 | Cam01g1647 | Cam-Chr1:30072272 | 2.00E-247 | dispersed | |
| Cam01g1644 | Cam-Chr1:30021152 | Cam01g1645 | Cam-Chr1:30046111 | 6.30E-249 | tandem | |
| Cam01g1645 | Cam-Chr1:30046111 | Cam01g1646 | Cam-Chr1:30057466 | 6.70E-275 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam01g1645 | - | - | - | 0.0 |