Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1710 ATGAAGGATAACTCCTCCAAATATGTTGTTTTCTTGCTTATAAGCTTCTTTTTCTTGAATCAGCTCCTTGTGTCCTCACAACTTGATTATAGGTTCTATGATGCCTCTTGCCCCAACCTAACAAGGATTATAAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCTCTCTTACGGCTTCATTTTCATGATTGCTTTGTCAACGGTTGTGATGGATCATTGTTGCTTGATGACACTAGCACATTTAGGGGGGAGAAAAATGCATTGCCGAATATGAACTCAGTTCGAGGCTATGAAGTCATTGATAATATAAAGGCTGTCTTAGAGAAAGTCTGCCCATATGTTGTCTCATGTACTGATATAGTAACTCTAGCAGCTAGAGAGGCTGTCTACCTTGCTGGGGGACCATTTTGGCAAATTCCACTTGGTCGCCGAGATGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCATCACCAGTTGAGCCATTGGAGAATATCATGGCGAAATTCATTTCGAAAGGGTTTGATGTGAAGGATGTTGTTGCTCTCTCAGGTGCACACACTTTCGGATTTGCTCGGTGCATGATGTTCAAGCACAGGCTGTTCAACTTCGATGGCACTGGAAATCCCGATCCAGAACTCGACGTCATGCTGCGACAGAACTTACAGAGCAATTGTCCAAATCAAGATGACTCCAACAACAAATTTGCCCCCTTGGATGCCTACACGATCAACCGGTTCGACAATGTGTATTACAGGAACTTGGTGAACAAGTTGGGACTTCTGCAGTCAGACCAAGCTCTCATGAAAGATAATACAACTGCTTCTTTGGTGGTGAACTACAGCAGGTATCCATATCTGTTTTACAGGGACTTTGGAGCATCAATGGTGAAGCTGGCCAATACTGGGATCCTTACAGGCCAAAATGGGGAGATTAGGAAGAATTGCAGGATGGTGAACTAG 984 44.31 MKDNSSKYVVFLLISFFFLNQLLVSSQLDYRFYDASCPNLTRIIRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTSTFRGEKNALPNMNSVRGYEVIDNIKAVLEKVCPYVVSCTDIVTLAAREAVYLAGGPFWQIPLGRRDGTTASESEANQLPSPVEPLENIMAKFISKGFDVKDVVALSGAHTFGFARCMMFKHRLFNFDGTGNPDPELDVMLRQNLQSNCPNQDDSNNKFAPLDAYTINRFDNVYYRNLVNKLGLLQSDQALMKDNTTASLVVNYSRYPYLFYRDFGASMVKLANTGILTGQNGEIRKNCRMVN 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30679289 30680819 + CaPI482276_01g017100.1 Cam01g1710 118792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1710 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 Pfam Peroxidase 48 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Cam01g1710 327 FunFam Peroxidase 31 179 - -
Cam01g1710 327 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam01g1710 327 Gene3D - 31 327 - -
Cam01g1710 327 Gene3D Peroxidase, domain 2 164 306 - -
Cam01g1710 327 PANTHER PEROXIDASE 72-RELATED 16 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 FunFam Peroxidase 164 306 - -
Cam01g1710 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam01g1710 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1710 Cam-Chr1:30679289 Cam02g2442 Cam-Chr2:36883037 2.90E-90 dispersed
Cam11g0736 Cam-Chr11:9148457 Cam01g1710 Cam-Chr1:30679289 2.70E-53 dispersed
Cam02g1948 Cam-Chr2:32607469 Cam01g1710 Cam-Chr1:30679289 4.80E-70 transposed
Cam03g0407 Cam-Chr3:5160364 Cam01g1710 Cam-Chr1:30679289 8.10E-67 transposed
Cam03g0418 Cam-Chr3:5208536 Cam01g1710 Cam-Chr1:30679289 8.10E-67 transposed
Cam06g0124 Cam-Chr6:3182004 Cam01g1710 Cam-Chr1:30679289 1.40E-50 transposed
Cam09g2302 Cam-Chr9:37497736 Cam01g1710 Cam-Chr1:30679289 9.30E-59 transposed
Cam01g1710 Cam-Chr1:30679289 Cam09g1808 Cam-Chr9:32443025 2.60E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1710 K00430 - csv:101218459 634.795