Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1736 ATGTCTGATCACAAATCAGGCTCCATGGCCGATCAGCTCTCTAAGCAGACCTCTATTTTTGGCCTACGCTTGTGGGTTGTTCTTGGGGTTTGTGTTGGAGCCGCTTTTGTGCTCTTTCTGTTTCTAATTTCTCTTTGGATTGCTTCTAAACGCTCCCGCAAGAAGATTTCTCACAGACCCACTATCCCAATCGTCTCCAAAGAAATCCAAGAGATCAGAGTCGATCATGCCCTCGCTCAAAACCAAGAACATAAGCCGAGTAGGTCCCATTTTCAGGTCGACCCACTTCCGGAGCCGGAACCAATCCCTGGAATTGAGCGGCAGGCGTTGCTTTCGTTGCCTCAGGAGGAAGAGCGAGTGAATAGGATTCATATTGAGATCGGGAAAGATCATAGGATTTCATATCCTGAGCGCCTTGGTCGGTCGTCTTCCTCACAGGGGAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGACACTGGTACACTCTCAGAGAGCTTGAAGCTTCGACTAATGGTTTCGCCCCCGACAATGTAATTGGCGAGGGTGGGTATGGAATTGTTTACCATGGCATATTGGAAGATGGAACTCAGGTTGCTGTGAAGAATTTGCTAAACAATAGGGGCCAAGCCGAGAAGGAGTTTAAAGTTGAAGTTGAAGCAATTGGACGAGTTAGACATAAGAACTTAGTTAGACTGCTTGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATATGAGTATATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTGGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAATATCATTCTTGGAACCGCAAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCAAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTCGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATGCTCTGATAATAGTTATATTACAACCCGAGTAATGGGGACATTTGGCTATGTAGCACCAGAATATGCAAGTACGGGAATGCTAAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTTGTTATGGAAATAATCTCAGGACGTAATCCCGTTGAGTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTCAAGAGAATGGTCACTAACCAAACTCCAGAGGGCGTATTGGATCCAAAGCTTTCTGAAAAGCCTACTTCAAGAGCATTAAAGCGGGCTCTACTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCCGAAGATGCTAACTTGAAAGGGGATCGCAAAGCTGGAAAGGACCCAGAGAATTCACATTCAAACAATGTCAAAGATGGTTTAAATGAAAGGCAGGCAACAGAATTAGGTGGCAGCAGTGTCAATGGACTCAGTACTCGACAACGAGATATGTGA 1530 45.16 MSDHKSGSMADQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKKISHRPTIPIVSKEIQEIRVDHALAQNQEHKPSRSHFQVDPLPEPEPIPGIERQALLSLPQEEERVNRIHIEIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFAPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVEYSRPPDEVNLIDWLKRMVTNQTPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEDANLKGDRKAGKDPENSHSNNVKDGLNERQATELGGSSVNGLSTRQRDM 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30948296 30950911 - CaPI482276_01g017360.1 Cam01g1736 118818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1736 509 Pfam Protein kinase domain 190 455 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g1736 509 MobiDBLite consensus disorder prediction 465 479 - -
Cam01g1736 509 MobiDBLite consensus disorder prediction 465 509 - -
Cam01g1736 509 Gene3D Transferase(Phosphotransferase) domain 1 262 472 - -
Cam01g1736 509 Gene3D Phosphorylase Kinase; domain 1 167 261 - -
Cam01g1736 509 ProSiteProfiles Protein kinase domain profile. 186 458 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g1736 509 FunFam Probable serine/threonine-protein kinase At1g01540 166 261 - -
Cam01g1736 509 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Cam01g1736 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g1736 509 SMART serkin_6 186 457 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g1736 509 PANTHER OS01G0323000 PROTEIN 8 484 IPR052232 -
Cam01g1736 509 CDD STKc_IRAK 192 458 - -
Cam01g1736 509 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524(InterPro)
Cam01g1736 509 MobiDBLite consensus disorder prediction 480 509 - -
Cam01g1736 509 FunFam Putative receptor-like serine/threonine-protein kinase 262 472 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1736 Cam-Chr1:30948296 Cam05g0162 Cam-Chr5:1791345 2.10E-167 dispersed
Cam07g0821 Cam-Chr7:20608312 Cam01g1736 Cam-Chr1:30948296 1.30E-31 dispersed
Cam01g1736 Cam-Chr1:30948296 Cam08g2079 Cam-Chr8:26348287 1.00E-198 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84890 PF00069 Pkinase 2.90E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1736 - - - 0.0