Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g1749 | ATGAATAAACTCAGTTGGGAATTGAATTACATCATCCATCCAAACAGATTAAACAAACGTGAAATTAGCCAATCGATCGCCAATTTTATCAAAGTTCTTCACGCCCTACACGACCTTCGCGGAGATCTTAACTGGACGCGCCATCTTCTTCGCTTCCTTTCCTTCCCAATCATTGGTTCCATGAGATCGAGCCCAAGTTTTCTATTCGTCGCTGATAATAAAGCAACAAACCTGATTCATTTGTATGATAAAATGGATAATGGAACTTCCAATAGTTCAACTCAATCTGCAGTCACCAATTCAGCTCCAATAGTTGATAGCCAAAGTAGTAAAGGAGATAATTTGACATCTATTTTATCTTCGTCTGGAATATCATCTTGGGCTAAGAGTTTCAGAAATCCACGACCACCTGAAGCAGCAGAAAATGACTCCAAAGCAGGAAATTCTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGTTTTGGACTCCGGATACCTGCGATGTCTCCTGTACAAAGTGATGGTGCTGCAGATACCAAACCAGCAATGCAATCTGGTGTTTTTGAATCATTCACAAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAAGCACGTCATATTGTCTCTCAGAACAAGCGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACCGAAAACATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTTTTTTCGGATTCCTTGAGGGATTTTACAGAAACCATATGGAGGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCGCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCACAAGATCATTTTGTCAAAGTGCATATGCATGGTTAAAGGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTCTTCCAAACATCAGCAGAGGCGATTGACTATTATAATCAGAAAAGATGCGTGGATGGGAAGGCTTTGGTTCTTCCTAGCCAGATTAGGTATGTCAAGTATTTTGAGCGGATTTTAACACATTTCAACGGAAATACTCCACCAGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCCATTACGATATCAAATCACAGTGAGATTTTGTTCTCAACAAGAAAGCATCCAAAGACAAAGGATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAAGAAAGGATTTGTAGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTGTCTGGGGATTTCAAGATTCATTTTCATGACCGGCATGGAGACTTTTACTGTTGGTTAAATACAACAATGACAGAAAACAAAATATTATTAAGTGACACGGATCTTGATGGTTTCGATAAGAGAAAACTTCCAACCCCTGGATTTCAAGTCGAAGTTGTGATGATTGACTATGATGGTTCTTTGTCAACACGATTGAAAACTGATTCAACTAGCAAAGGATCTGATCGTCACTCTATTCATGATCGAGCATCAGGTAATGAAGCAGCACAATCCAACACAAACAAAATTTCCGGAGGTGAAGAAAATGATGACGACGTATTCTCCGACAGTGATGAAGAAAATGGTGACATAAAAACCAGTCTAGCTCAATCAACTTCTGGAACTGGAAATGGGACTTCAAAAGCTGATCATTCATCAACAACAATTGCCTCCGGAAGAATTGGGAGTTTAGCGCATGACACTAGTTGTTTGACCCTCGGAAATGAGAAAAACTCACAACCTAGTGCTCCAAAAGAACCTGCCGTAATACAACCATCAGCCCTTGAGATCCCAAATTTGGATTTAGTAAGGGCAAGTGATTTCAAGGCAATAGCCGCCGATGCGTCAGTCTTCACATTTGGGGATGAAGAAGACTTTGATAGTGAATGA | 2073 | 40.57 | MNKLSWELNYIIHPNRLNKREISQSIANFIKVLHALHDLRGDLNWTRHLLRFLSFPIIGSMRSSPSFLFVADNKATNLIHLYDKMDNGTSNSSTQSAVTNSAPIVDSQSSKGDNLTSILSSSGISSWAKSFRNPRPPEAAENDSKAGNSGMSAIARFSSGFGLRIPAMSPVQSDGAADTKPAMQSGVFESFTKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGHMSSGFFGFLEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDAALFEGKVAHFPFDDHNCPPIHLTRSFCQSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFQTSAEAIDYYNQKRCVDGKALVLPSQIRYVKYFERILTHFNGNTPPGRRCMLRGFRLHKCPYWVRPSITISNHSEILFSTRKHPKTKDLMPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKILLSDTDLDGFDKRKLPTPGFQVEVVMIDYDGSLSTRLKTDSTSKGSDRHSIHDRASGNEAAQSNTNKISGGEENDDDVFSDSDEENGDIKTSLAQSTSGTGNGTSKADHSSTTIASGRIGSLAHDTSCLTLGNEKNSQPSAPKEPAVIQPSALEIPNLDLVRASDFKAIAADASVFTFGDEEDFDSE | 690 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 31090180 | 31095422 | + | CaPI482276_01g017490.1 | Cam01g1749 | 118831 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g1749 | 690 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 333 | 372 | IPR000387 | GO:0016311(InterPro) | |
Cam01g1749 | 690 | MobiDBLite | consensus disorder prediction | 592 | 622 | - | - | |
Cam01g1749 | 690 | Pfam | PTEN2, C2 domain | 405 | 533 | - | - | |
Cam01g1749 | 690 | Pfam | Polymorphic toxin system, DSP-PTPase phosphatase | 297 | 353 | - | - | |
Cam01g1749 | 690 | ProSiteProfiles | C2 tensin-type domain profile. | 405 | 532 | IPR014020 | - | |
Cam01g1749 | 690 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 206 | 610 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
Cam01g1749 | 690 | SMART | PTEN_C2_2 | 403 | 531 | IPR014020 | - | |
Cam01g1749 | 690 | MobiDBLite | consensus disorder prediction | 538 | 622 | - | - | |
Cam01g1749 | 690 | MobiDBLite | consensus disorder prediction | 127 | 149 | - | - | |
Cam01g1749 | 690 | CDD | PTP_PTEN | 229 | 394 | IPR045101 | GO:0016791(InterPro) | |
Cam01g1749 | 690 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 219 | 398 | IPR029023 | - | |
Cam01g1749 | 690 | MobiDBLite | consensus disorder prediction | 544 | 558 | - | - | |
Cam01g1749 | 690 | Gene3D | Protein tyrosine phosphatase superfamily | 204 | 401 | IPR029021 | - | |
Cam01g1749 | 690 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 204 | 401 | - | - | |
Cam01g1749 | 690 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 335 | 345 | IPR016130 | GO:0016311(InterPro) | |
Cam01g1749 | 690 | MobiDBLite | consensus disorder prediction | 89 | 113 | - | - | |
Cam01g1749 | 690 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 232 | 399 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g1749 | Cam-Chr1:31090180 | Cam10g1514 | Cam-Chr10:28889371 | 8.50E-39 | dispersed | |
Cam01g1749 | Cam-Chr1:31090180 | Cam02g0659 | Cam-Chr2:7629061 | 2.20E-204 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g1749 | K01110 | - | csv:101213277 | 1098.19 |