Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1779 ATGGCGAATCCGGTTTGGATTTTTCTTCTTTTCTGTTTCTTCTCTGTGCCGTCCATGGCTGCCACACAGAAGAAGAAGACTTACATCGTGCATATGGCTAAATACCAAATGCCCGAGAGTTTTGAACACCACTTGCACTGGTACGACTCCTCACTCAGATCCGTGTCCGATACTGCTGAGATGATCTATGCTTACAACAACGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGATGAAGCTCAGCGGCTCGAGGCCCAACCTGGGATTCTGGCTGTGGTGCCCGAGATGAGATATGAACTTCATACAACTCGTACTCCGCAGTTTCTTGGACTCGACAAGAATGCAAATCTTTACCCTGAATCCAATTCTGTGTCGGAGGTCATCATCGGAGTTTTGGATACTGGGATTTGGCCGGAGAGTAAAAGCTTCGATGATACTGGGCTTGGACCGATACCGAGTAGCTGGAAGGGTGAGTGTGAATCAGGTACTAATTTCAGTGCGTCGAACTGCAACAGGAAGCTGATTGGAGCTAGATTTTTCTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGATGAATCGAAAGAATCGAGATCTCCGAGAGATGACGATGGCCATGGAACCCACACCGCTACAACTGCCGCCGGTTCTGTAGTTGAAAACGCGAGCCTATTTGGGTATGCCTCCGGCACCGCCCGTGGGATGGCCGCGCGTGCGAGGGTCGCCGCCTACAAGGTTTGCTGGACCGGTGGATGTTTCAGCTCCGATATCTTAGCCGCCATTGAAAAGGCTGTGGTGGACAATGTTAATGTCCTTTCCTTGTCGCTTGGCGGTGGAGTATCCGATTATTACAAGGACAGTGTTGCCACCGGCGCATTCGCTGCCATGGAGAAAGGCATCCTCATTTCTTGCTCTGCCGGAAATGCCGGCCCCAGTCCTTACAGCTTGTCAAATACGTCTCCATGGATTACAACCGTCGGTGCCGGAACATTAGATCGCGATTTTCCGGCGTACGTCAGTCTTGGTGACGCCAAGAACTTCTCCGGCGTTTCGCTCTATCGAGGCAAGGCATTGCCTGGAACGTTGTTGCCTTTTATTTACGCTGCTAACGCGAGTAACTCTGGTAATGGCAATTTGTGTATGACCGGTACTTTGATCCCTGAAAAAGTCGCCGGAAAGATCGTTTTCTGCGACCGAGGTGTAAACCCTAGGGTTCAGAAAGGTGCGGTCGTCAAAGCTGCAGGTGGAATCGGAATGGTGCTGGCCAATACTGCCGCAAATGGAGAAGAGCTGGTGGCTGACTCTCATCTTCTGCCGGCCACGGCTGTCGGTCAGAAATCCGGTGACATTATACGGAAGTATCTCATTTCGGAGCCCAATCCGACGGTGACGATCTTATTCGAAGGGACTAAATTGGGGATCGAACCATCGCCGGTGGTGGCGGCGTTTAGCTCCCGAGGACCAAATTCGATCACTCCTCAGTTGCTGAAACCCGACATAATAGCCCCTGGCGTCAACATCTTAGCTGGATGGTCAAAATCAGTGGGACCAAGTGGTTTAGCCATTGATGACAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCCGCTCTGATCAAGGGCGCTCATCCCGATTGGAGTCCGGCGGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCCTACAAAAACGGCCAAAAGATCCAAGATATCGCCACCGGAAAACCATCCACCGCATTCGATCACGGAGCCGGACACGTCGATCCCGTGTCAGCTCTCAATCCGGGTCTTGTTTACGATCTAACGGTGGACGATTACCTAAACTTCCTATGCGCACTCAACTATACTCCGTCGCAGATCAACTCATTGGCAAGGAGAGATTTCACTTGCGACCCCAAGAAGAAGTACAGTGTTAACGATCTCAACTACCCTTCTTTCGCCGTCGTTTTCGACGGCGTATTGGGCGGTGGAGGCAGTGGTTCCAGCGTAGTCAAGCACACCAGAACTCTTACAAACGTCGGCTCCCCAGGAACCTACAAAGTCTCAATCTCGTCGGAGACCAAACTGGTGAAAATCTCTGTCGAGCCGGAATCTTTAAGCTTCACGGGAGCCAATGAGAAGAAGTCATATACAGTCACATTCACCACCGCGACTGGTTCGGCGGCGCCACCCAACGCGGAAGGGTTCGGTCGAATTGAGTGGTCGGACGGGAAGCACGTGGTGGGTAGTCCGATTGCGTTTAGCTGGACATAG 2289 52.08 MANPVWIFLLFCFFSVPSMAATQKKKTYIVHMAKYQMPESFEHHLHWYDSSLRSVSDTAEMIYAYNNVVHGFSTRLTADEAQRLEAQPGILAVVPEMRYELHTTRTPQFLGLDKNANLYPESNSVSEVIIGVLDTGIWPESKSFDDTGLGPIPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWTGGCFSSDILAAIEKAVVDNVNVLSLSLGGGVSDYYKDSVATGAFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSLGDAKNFSGVSLYRGKALPGTLLPFIYAANASNSGNGNLCMTGTLIPEKVAGKIVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPATAVGQKSGDIIRKYLISEPNPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVGPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGAHPDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTAFDHGAGHVDPVSALNPGLVYDLTVDDYLNFLCALNYTPSQINSLARRDFTCDPKKKYSVNDLNYPSFAVVFDGVLGGGGSGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTGANEKKSYTVTFTTATGSAAPPNAEGFGRIEWSDGKHVVGSPIAFSWT 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31352739 31355027 - CaPI482276_01g017790.1 Cam01g1779 118861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1779 762 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Cam01g1779 762 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Cam01g1779 762 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Cam01g1779 762 ProSiteProfiles Serine proteases, subtilase domain profile. 98 605 - -
Cam01g1779 762 CDD PA_subtilisin_like 339 466 - -
Cam01g1779 762 MobiDBLite consensus disorder prediction 191 209 - -
Cam01g1779 762 MobiDBLite consensus disorder prediction 191 214 - -
Cam01g1779 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 757 IPR045051 -
Cam01g1779 762 FunFam Subtilisin-like protease SBT1.9 16 102 - -
Cam01g1779 762 Pfam PA domain 381 451 IPR003137 -
Cam01g1779 762 Gene3D - 622 761 - -
Cam01g1779 762 Pfam Subtilase family 127 578 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam01g1779 762 CDD Peptidases_S8_3 99 571 IPR034197 -
Cam01g1779 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 102 IPR037045 -
Cam01g1779 762 Pfam Fibronectin type-III domain 652 758 IPR041469 -
Cam01g1779 762 FunFam Subtilisin-like protease SBT1.5 127 349 - -
Cam01g1779 762 Gene3D - 333 474 - -
Cam01g1779 762 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Cam01g1779 762 SUPERFAMILY Subtilisin-like 101 609 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1779 762 Gene3D Peptidase S8/S53 domain 128 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam01g1779 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Cam01g1779 762 FunFam subtilisin-like protease SBT1.5 333 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1779 Cam-Chr1:31352739 Cam03g1524 Cam-Chr3:30176632 4.50E-235 dispersed
Cam02g1236 Cam-Chr2:24515148 Cam01g1779 Cam-Chr1:31352739 2.20E-213 transposed
Cam09g0130 Cam-Chr9:2116395 Cam01g1779 Cam-Chr1:31352739 3.90E-211 transposed
Cam01g1779 Cam-Chr1:31352739 Cam08g2112 Cam-Chr8:26545423 2.70E-296 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1779 - - - 0.0