Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1872 ATGCAACCTCCTCAACCTGGAAGATTTGAAGATCGTGAAGATCTCATTAAATATGTTCGTGATTTTGGTGCTGATCAAGGATATGTGGTAACAATTAAGAAGTCTAGGAAAGATAGAAGGGTCATCCTTGGTTGTGATAGAGGAGGCGTGTACCGTAATAGGCGTAAGATTGATGAGAGTCCACGCAAAAGGAAAGCTAGCTCGCGCCTGATAAATTGCCCGTTTGAAGCAATTGGCAAGAAGGAAGATGATGCCTGGATGCTTACCATTAAAAATGGGGACCATAACCATGAGCCCTTAAAAGACATGTCAGAGCATCCTTACAGTCGCCGTTTTACTGAGGATGAAGTAAAGCAAATAAAACTGATGACTGAAGCTGGTATAAAACCACGTCAAGTGCTTAAAGCTCTCAAACAACACAATCCAGATCTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCCAAAATTCGCCAAGGAAATCTATCAGAAAAAAATTTCAAGTCATGGAGACCTAATATTTCAGTTCCTACAAATAGTAGTCATACTGTCATTGGGGATTCAGTCAAGCAAAATCATCAGCTGAAGGTTCCTAATTTAATTGGAGGGGAATTTTTGGATTCGCACAACTGTCCAGTGGTTGATGTTATTAATCCAGCAACACAAGAAGTTGTTTCTCATGTCCCTTTAACAACCTACGAAGAGTTTAAGGCTGCAGTTAATGCAGCCAAACAAGCTTTTCCCTCATGGAGAAACACACCGATTTCTACTCGTCAATGTGTTATGTTCAAGTTTCAGGAGCTCATCCTCAGGGACATGGATAAGCTTGTGACGAATATTGTCACAGAACAGGGAAAAACATTAAGGGATGCTCAAGATGATATTATCTGTGGTTTAGAGGTGGTTAAACATGCTTGTGGATTGGCCACAATGCAAATGGGGGAGTTCATCCCTAATGCAACTGATGGAATTGATTCGTACTGCATCCGAGAACCAATAGGTGTGTGTGCTGGGATATGCTCTTTAAACCATCCAGCAACAGTTTCCTTATGGATGTTTCCGATTGCAGTTACTTGTGGCAATACATTTGTTCTTAAGCCATGTGAAACGCACCCGGGGGCTTCAATGTTGCTTGCTGCATTAGCAGTTGAGGCTGGCTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATCATCAACTATATATGTGATGATGAAGACATAAAAGCCATATCTTTTTCCAGTTCAAGTTCAGTTGGAAAGAACATATATTGTAGGGCTGCTACTACAGGAAAGCAAGTTCAGTCCCACTTTGGAGGCAAGAGTCATGCAATTATTATGCCTGATGCTAACATGGAGGCTACTTTAAGTGCTCTGGTTGATGCTGGATTTGGTACTGCTGGACGGACATGTTTGGCTATCGACATCGTTGTCTCCGTTGGGAGTTCAATTCTGTGGGAAGAAAAAATTGTGGAATGTGCCAAAGCACTTAAAGTGAATGTGGGGACAGATCCCAAAGCTGACCTTGGTCCTGTAATTACCAAACAGGTGAAAGATCGCTTTTGTAAATTAGTTCAAAGTGGCATTGAAGATGGTGCCAGACTTTTGCTTGACGGTAGAGATATTGTGGTCCCAGGATATGAAAATGGAAATTTTGTTGGTCCAACCATTTTATCTGATGTAACAACTGACATGGAGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTGTATGCAGGCTGACAACCTAGAGGAGGCCATATCCATTGTAAACAGAAACAAGAACCGAAATGGAGCTTCCATATTCACAACTTCTGGCATTTATGCGAGGAAGTTTCAGAGTGACGTGGAAGTGGGAATGGTTGGTACCAATGTTGCTGTTACAGTTCCGTTGCCATCTTCCTTTAATGATAAGGCAGGACTGGAGTTTTACACCCAATTGAAAAGAGTGGCTCAACAGTGGAAGAACTCACCAAGTATTGGAGTGTCAATGGCGCTGCCTTCACCATCTGAGAGACATTTGAGATCCCGTGCTGTACCTTCCATGTTGGTTTCAACATCTGAGAAAGATTCACCTGGGATGCAGCACAAAAGTTTACCCCCATTGCCTTCCACATCTGAGAGGGATTCACCTGGTGTCGCTGTACTGCTGCCGAACTCTCGAATATCTCAGACAGGTTTAACCAATGAAAGAGCCACCTCCTCTCCGCCGACTCCTGATAGGGATTTGCACGGTCAGGGACTTTCCCTGATTTCTACCTTGTCATCAGAGGGGGACGTATCCAACCAAGATTTGTCTCCTGCTATGCTTTCAGCAGGCGATAGAGATTTACCTGGTCAAGCTGTGTCAGTGGCAACATCCCGATCATCTGAGCGACTGTATATACCTCAGAAATCTCATTGGAACGCAACCCTGAGGGCTGATTCAATTCCATCCAGTTCTGAGAGGATCCATGCGCCCTCATCGCACACAAACAACATCAAAGGGCAGGCATCTCGAACAACTCATCCGGCTTTGGTCTTAGCTGCAGAGGGGTTATATGTGCCAACATCTCATGACAGTATTTGTCTCATTAACCATAGAAATGATAGTACGGTTCCATCTCGAAGAATTGACAGCGTGTGTCAATCATCAGAACGGAGAGGCATTATGTGCCTCCCTCTTCTGATGGAAATGACCATATCAGCTTAG 2709 43.45 MQPPQPGRFEDREDLIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESPRKRKASSRLINCPFEAIGKKEDDAWMLTIKNGDHNHEPLKDMSEHPYSRRFTEDEVKQIKLMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSEKNFKSWRPNISVPTNSSHTVIGDSVKQNHQLKVPNLIGGEFLDSHNCPVVDVINPATQEVVSHVPLTTYEEFKAAVNAAKQAFPSWRNTPISTRQCVMFKFQELILRDMDKLVTNIVTEQGKTLRDAQDDIICGLEVVKHACGLATMQMGEFIPNATDGIDSYCIREPIGVCAGICSLNHPATVSLWMFPIAVTCGNTFVLKPCETHPGASMLLAALAVEAGLPDGVLNIVHGTHDIINYICDDEDIKAISFSSSSSVGKNIYCRAATTGKQVQSHFGGKSHAIIMPDANMEATLSALVDAGFGTAGRTCLAIDIVVSVGSSILWEEKIVECAKALKVNVGTDPKADLGPVITKQVKDRFCKLVQSGIEDGARLLLDGRDIVVPGYENGNFVGPTILSDVTTDMECYKEEFFGPVLLCMQADNLEEAISIVNRNKNRNGASIFTTSGIYARKFQSDVEVGMVGTNVAVTVPLPSSFNDKAGLEFYTQLKRVAQQWKNSPSIGVSMALPSPSERHLRSRAVPSMLVSTSEKDSPGMQHKSLPPLPSTSERDSPGVAVLLPNSRISQTGLTNERATSSPPTPDRDLHGQGLSLISTLSSEGDVSNQDLSPAMLSAGDRDLPGQAVSVATSRSSERLYIPQKSHWNATLRADSIPSSSERIHAPSSHTNNIKGQASRTTHPALVLAAEGLYVPTSHDSICLINHRNDSTVPSRRIDSVCQSSERRGIMCLPLLMEMTISA 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32241774 32251460 + CaPI482276_01g018720.1 Cam01g1872 118954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1872 902 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 673 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Cam01g1872 902 SUPERFAMILY ALDH-like 191 662 IPR016161 GO:0016491(InterPro)
Cam01g1872 902 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 217 442 IPR016162 GO:0016491(InterPro)
Cam01g1872 902 CDD ALDH_F6_MMSDH 198 660 IPR010061 GO:0004491(InterPro)
Cam01g1872 902 MobiDBLite consensus disorder prediction 819 838 - -
Cam01g1872 902 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 443 642 - -
Cam01g1872 902 MobiDBLite consensus disorder prediction 688 752 - -
Cam01g1872 902 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 200 660 IPR010061 GO:0004491(InterPro)
Cam01g1872 902 Pfam Aldehyde dehydrogenase family 209 637 IPR015590 GO:0016491(InterPro)
Cam01g1872 902 MobiDBLite consensus disorder prediction 688 711 - -
Cam01g1872 902 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 202 449 - -
Cam01g1872 902 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 443 637 IPR016163 GO:0016620(InterPro)
Cam01g1872 902 MobiDBLite consensus disorder prediction 723 746 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1872 Cam-Chr1:32241774 Cam09g1553 Cam-Chr9:26092875 1.50E-192 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1872 K00140 - csv:101207178 1609.73