Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g1975 ATGGCGGATATTCTCAGCGCTTTGAGAGTTCTAATGGCGTCCCATACTCCTCCTCTTGACGCCTTGGTTGTTCCTTCTGAGGACTATCACCAGAGTGAATATGTATCTGCGAGAGATAAACGACGTGAATTTGTGTCAGGTTTCACCGGAAGTGCTGGTCTGGCCCTTGTAACTCAGAGAGAAGCATTACTGTGGACCGATGGGCGATATTTCCTGCAGGCAATTCAACAGCTTAGTGATCAGTGGAAACTTATGCGAATGGGAGAGGATCCTTCTGTAGATCTCTGGATGGCTGAGAATCTTCCAGCAGATGCAGCTGTTGGAGTGGATCCATGGTGTGTGTCAGTGGACACAGCACAAAAATGGATTCACGCATTTTCCAAGAAGCAGCAGAAGCTGGTTCAAACCACCACGAACTTAGTTGATGAAGTTTGGAAGAACCGACCACCACCAGAAATAAATCCTGTTATGATACACCCACTGGAATATACTGGCCGCTCTGTTGAAGATAAGTTGAAGACTTTGAGAACAAGGCTTTTGCAAGAGAAAGCTCATGGTTTAATTGTGACTGGACTTGATGAAGTAGCTTGGTTGTACAACATCCGTGGGAGTGATGTGTCATACTGTCCAGTTGTACATGCATTTGCAATAGTGACACTCAATTCAGCGTTCTTTTATGTGGACAAGAGGAAGGTGTCTGATGAGGTGCGCTTGTACATGGAGCAAAATGGAATTGAAGTTCGGGATTATAGTGCAGTAATAACAGATGTGTCCTTACTTGCATCTAATCAACTTAACTTGTCATCTTTTGTGAAAGGACCTGAAGTTAGGGCTAATATGGAAGTAGAACTCAGTTCGATTGACATAGCAGGATCTAATGGAACTAAAGTAGAAAGCCAGAGTTCTGGCCTCATATGGCTTGATCCTGCCCAATGCTGCTATGTTTTGTATTCTAAACTGAACTCTGATAAGGTTCTCCTGCAACAGTCGCCATTGGCCCTTGCGAAAGCTCTAAAGAACTCTGTTGAGTTGGACGGACTAAAGAAGGCACACATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTGTGGTTGGACAAGCAGCTGCAAGACATTTATGGTGCTGCTGGTTACTTTCGGGAAGGGGATGGAGTGAGGAAGCCCAAACCGTCGGACTCAAAGAAACTAACAGAAGTTAGTGTAAGCGATAAGCTTGAGGCTTTCCGAGCATCGAAGGAGCATTTTAGAGGCCTAAGTTTCCCTACTATTTCATCTGTTGGTTCAAATGCTGCAATTATTCATTATGGACCACAAGCAGAGACATGTGCTGAGTTGGATCCTGAAAGCATCTATCTTTTTGACTCGGGAGCTCAGTATTTGGATGGAACAACCGATATCACGCGGACAGTCCATTTTGGATTACCTTCAGCACATGAGAAAGCTTGTTATACTGCAGTTCTCAAAGGCCATATTGCTTTGGGAAATGCAAGATTTCCAAATGGCACAAATGGCCACTCATTGGACATTCTTGCTCGAGTTCCCTTGTGGAAGGATGGTCTGGATTATCGACATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGACCCCATTTAATTAGTTTCAGACCACAGGCTCGAAATGTTCCTCTTCAAGCTTCAATGACTGTTACGGATGAGCCTGGCTATTACGAGGATGGTGCCTTCGGTATTAGGTTGGAGAATGTACTTGTAGTGAAGGATGCCGATACAAAATTTAATTTTGGGGATAAAGGCTACTTATCATTCGAGCACATAACATGGGCACCATACCAAAGAAAGTTGATCAACACAAGTCTTCTCACATCTGAAGAATTGGATTGGGTGAACACTTACCATTCAGAATGCAGGGATATTCTTGCTCCATATTTGGATGAATCCGAGAAGTTAAACAGTGCTGAGACTCACAATGCTAAAGTGCTTTTTGGGGAAGAGCCACTAGTTATTGCAAGAGGAGGGTTATCTGGAGTGTTTCCAGAATCAAGCCCTTTTGCAAATCAAATGGCTTTGGTTTCAGGTTTACATAACACAGTTTTGTATTGTAATCTTCAACTCACCAAAGATGCGGTAGGCATTTGCTTAACTGATCTCAGGCTTCAAAATTCAACCAATATTGAAGATGTTTTCCCTGGGGAACACAAGTCTTATAATGTTAATGGAAAGATTATCAAAGGATGGTTTTCTGTTGATTACATGTCTAGGACTCTCTTTAACAAACTCTTCATGATTCAAAGTGTCCTCTCTCGTCCTAGTCTCTACGACGGTACTTTGCCAATCGCGGCTGTCGAAGATGTCATGGGGATTAAACCGACTCAGTTTTGGTTGAATGCCGAGCACGAAGCATTCTACGCTGACCACAATTTGAGTGTATCATTATACCTTCAAAAGGCATTGAGAATGATGCGAATAAACTTTGTGTCATCTTCAGAGATTGGAATATTGAAAGGGATAAGTGGGAGTGTGAACAAAGCTAGAACAAAGCTGGTCTTCAGATTCTTAGAAGCCACTGAAATAGAACCAACAACAAAGAAAACATATGGTGTACTGGCTCAAGAACTTCCCATGATTAAGACATTTGCCTCAGGAATTCTCGTCAGAAAAGAATACATTTGGCCAATTGGTCAAGACAAGTATGTGCAGCCTGCAACAACTCTTGTCATGGATGCTCATAAGCTTGGCTTGGAAGTTTATGCTTCTGGCTTTGCAAATGATGCCATTGTTGGTTACAATTATAGCTATGATCCAATCCGTGAATACCTTCAGTATTTTGATAATGGCCATTTTGCTGTTGATGGGGTCCTTACTGATTTTTCTCCTGCTGCTTCTCAAGCCATTGCCTGCTATTCGACTTTTCGCAACAATGGCAAGCCTCAACCTGGATTAGAGCAAGCATTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTCCCAGGCTCAACTGACCTTGCTTACCAAAGAGCAATTGATGATGGGGCTGATGTTATTGATTGTTCAGTTCAATTATCAAAAGATGGAGTTCCTTTCTGTATGGATATGGCAGATCTTTTGACAGGTACAACTGTTGTCACTTCTTTCTCAGCTCGAACTACAACTATCCCTGAAGTTCAATCTGAAGCTGGAATCTTCTCTTTTGATCTTACTTGGGCGGAGATTTTGACTCTCAAACCTCAAATTACAAACCCTTTCATGGCTTCTTCTGGCCTTGCTCGTAATCCAGCCTTTAAAAACAAGGGCAAGTTCATGACTCTCCCTGAGTTTCTAGAGTTTGCTAAAGCCAAAGCTGTTTCTGGGATTATGATCAACATCCAAAACGCGGCGTATTTGGCTTCAAAGAAAGGTCTAGACATGGTGGGAACGGTCTCCACTGCCATAATAAATTCCACTTTTGACAAACAATCAACACAACAAGTTTTCATTAGATCAGATGATACTTCTGTGTTGTCTTTTTTCAAGGCAAAGTTCCCAAGTTTCATTAGAGTTTTAACTGTTGACACAAAGATTGGTGATGCCCCAAAAGATGCTCTTGAAGAGATCAAACGCTATGCCGAAGTTGTAGCCATTCCTCGTGGCTCTATCATTGAAATAACAAACTATTTCACTACGGGCCTCACCAAAGTAGTTGCTGAAATTAAGGCTTCAAATCTCTCTGTCTTTGTTTATGTCATGAGAAATGAATATGTTTCCTTGGCCTTTGATTACTACTCTGAAGCCTCCACGGAAATTGCTACCTTTGTCGACTACTTCCACGTTGATGGCATCATTACCGAATTCCCCAATACCGCTAAACGATACATGACATGTCCATGCCGACCGACTCAGCTGAACCCGAATGGAGCTCCATATATAATTGTACCGCCTGAAATTGGTTTACTCATGGAAATGGTGGCTCCAGAGGCTAAACCACCTACTGATCCTCCATTGCCGCCATTGGATGCTGATAATGTCATTGATCCACCGCTCCCGGCGGTGGTCAAAACGTCAGCCAGCAATCCTTCAGGTGTTGCCGATGGGCCTGCCGCAGCCACCCCATCAGCCGCTGTATCAAATGTTGCTAACTTGTTTCTTTCTTTACTATCAGTTGTGGTGCTTAACTTCTTCATTTCACACTTCTGCATTGTAATAATCAATACTCATTAA 4185 42.84 MADILSALRVLMASHTPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTQREALLWTDGRYFLQAIQQLSDQWKLMRMGEDPSVDLWMAENLPADAAVGVDPWCVSVDTAQKWIHAFSKKQQKLVQTTTNLVDEVWKNRPPPEINPVMIHPLEYTGRSVEDKLKTLRTRLLQEKAHGLIVTGLDEVAWLYNIRGSDVSYCPVVHAFAIVTLNSAFFYVDKRKVSDEVRLYMEQNGIEVRDYSAVITDVSLLASNQLNLSSFVKGPEVRANMEVELSSIDIAGSNGTKVESQSSGLIWLDPAQCCYVLYSKLNSDKVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKQLQDIYGAAGYFREGDGVRKPKPSDSKKLTEVSVSDKLEAFRASKEHFRGLSFPTISSVGSNAAIIHYGPQAETCAELDPESIYLFDSGAQYLDGTTDITRTVHFGLPSAHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARVPLWKDGLDYRHGTGHGIGSFLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGAFGIRLENVLVVKDADTKFNFGDKGYLSFEHITWAPYQRKLINTSLLTSEELDWVNTYHSECRDILAPYLDESEKLNSAETHNAKVLFGEEPLVIARGGLSGVFPESSPFANQMALVSGLHNTVLYCNLQLTKDAVGICLTDLRLQNSTNIEDVFPGEHKSYNVNGKIIKGWFSVDYMSRTLFNKLFMIQSVLSRPSLYDGTLPIAAVEDVMGIKPTQFWLNAEHEAFYADHNLSVSLYLQKALRMMRINFVSSSEIGILKGISGSVNKARTKLVFRFLEATEIEPTTKKTYGVLAQELPMIKTFASGILVRKEYIWPIGQDKYVQPATTLVMDAHKLGLEVYASGFANDAIVGYNYSYDPIREYLQYFDNGHFAVDGVLTDFSPAASQAIACYSTFRNNGKPQPGLEQALVISSNGASGDFPGSTDLAYQRAIDDGADVIDCSVQLSKDGVPFCMDMADLLTGTTVVTSFSARTTTIPEVQSEAGIFSFDLTWAEILTLKPQITNPFMASSGLARNPAFKNKGKFMTLPEFLEFAKAKAVSGIMINIQNAAYLASKKGLDMVGTVSTAIINSTFDKQSTQQVFIRSDDTSVLSFFKAKFPSFIRVLTVDTKIGDAPKDALEEIKRYAEVVAIPRGSIIEITNYFTTGLTKVVAEIKASNLSVFVYVMRNEYVSLAFDYYSEASTEIATFVDYFHVDGIITEFPNTAKRYMTCPCRPTQLNPNGAPYIIVPPEIGLLMEMVAPEAKPPTDPPLPPLDADNVIDPPLPAVVKTSASNPSGVADGPAAATPSAAVSNVANLFLSLLSVVVLNFFISHFCIVIINTH 1394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33039869 33053779 - CaPI482276_01g019750.1 Cam01g1975 119057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g1975 1394 Pfam Glycerophosphoryl diester phosphodiesterase family 987 1276 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam01g1975 1394 CDD GDPD_SHV3_repeat_1 662 960 - -
Cam01g1975 1394 FunFam Xaa-Pro aminopeptidase P 337 656 - -
Cam01g1975 1394 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 524 536 IPR001131 -
Cam01g1975 1394 Gene3D - 146 335 IPR029149 -
Cam01g1975 1394 SUPERFAMILY PLC-like phosphodiesterases 661 959 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam01g1975 1394 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 978 1281 - -
Cam01g1975 1394 Gene3D Phosphatidylinositol (PI) phosphodiesterase 979 1282 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam01g1975 1394 Gene3D Phosphatidylinositol (PI) phosphodiesterase 660 961 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam01g1975 1394 Pfam Creatinase/Prolidase N-terminal domain 147 343 - -
Cam01g1975 1394 Pfam C-terminal region of peptidase_M24 596 644 IPR032416 -
Cam01g1975 1394 FunFam Xaa-pro aminopeptidase P 1 145 - -
Cam01g1975 1394 SUPERFAMILY Creatinase/aminopeptidase 340 621 IPR036005 -
Cam01g1975 1394 ProSiteProfiles GP-PDE domain profile. 662 961 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam01g1975 1394 CDD GDPD_SHV3_repeat_2 980 1280 - -
Cam01g1975 1394 Pfam Metallopeptidase family M24 348 583 IPR000994 -
Cam01g1975 1394 ProSiteProfiles GP-PDE domain profile. 980 1281 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam01g1975 1394 Gene3D Creatinase/methionine aminopeptidase superfamily 337 657 IPR036005 -
Cam01g1975 1394 Gene3D - 1 145 IPR029149 -
Cam01g1975 1394 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 646 IPR050422 -
Cam01g1975 1394 SUPERFAMILY PLC-like phosphodiesterases 981 1281 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam01g1975 1394 FunFam Probable Xaa-Pro aminopeptidase P 146 335 - -
Cam01g1975 1394 CDD APP 346 592 IPR033740 GO:0070006(InterPro)
Cam01g1975 1394 Pfam Creatinase/Prolidase N-terminal domain 6 138 IPR000587 -
Cam01g1975 1394 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 130 IPR029149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1975 Cam-Chr1:33039869 Cam09g2130 Cam-Chr9:35858212 4.40E-159 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g1975 K01262 - csv:101216415 1228.77