Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam01g2034 | ATGATGGACCTTAAAATGCTCTTCTTTGTTGAAATCTTAATTGGCTGTTGGTTTGGTTGTTCATTTCATCTTCTTGTGAAGCTTTATGACTCGTGCGTATATGGTGCGTGGTCTATTCTATTTGTTATTCCTGCGCGCTCTGTTTCTTATGATTATATAGCATTGGCTACTTCTTCTGTGAGCTTTGTGAACTACATCTTAATTCCGTTTGTTTCTTCTACCAACAGGATGCTGCAGAAAATACCAAGCTTTTATGGCAATTTTCAAGTCAGAGCAGCAGTTGAAGATATATTTCATTTGGGATGGATGAGGACATGGGATTGTTTGGTTTCCTTCAAAACATATGGAGCATTCTTTATCAGAACTTTCCATATTTTTTGCCTCGACCTGGAATTGTATTGGTGGATGGATATTTCTTGGTACTTGCCTTTGGTATTCATAGGTAAGATCTCTGAAGGGAATTTACCTATCGGCAAGCGCCGAGTAAACTTTCCCGCCGGGAAGACGAAGAAATTTTATGCTTCAACTCATCTATGTCAGCCGGATATGTGGCAGTGGGAGAATGCCACCGCCGGTGCCCTCGCCGGATTTGCCACCGTCGCCGCCATGCATCCTTTAGATGTCGTCCGCACCCGGTTTCAAGTTTATGATGGCAGAGGATCAAATCTCCCGACTTACAAGAATACGGCTAATGCAATCTTCACTATTACTCGGATGGAGGGCTTGAGAGGGCTATATGCAGGCTTCTATCCTGCAGTTCTCGGGTCATCTGTTTCTTGGGGTTTATATTTCTTTTTCTATGGTAGAGCCAAAGAAAGATATTCTGACAATGGAAAGAAGGACCTGAGTCCTAGTCTTCATCTTGCTTCTGCAGCGGAAGCAGGAGCTTTGGTTTGTTTTTGCACGAATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGGGTCCTCTTCATCAAGCTCAACCTTATTCTGGGCTATATGATGCCTTCAAAACCATTTTGAGAGAGGAAGGTTTTGCTGCTCTTTATAAAGGGATTGTTCCTGGCCTTATGCTTGTTTCTCATGGTGCCATTCAATTTACAGTTTATGAAGAACTCCGTAAAGTTATTGCCAACTCGAGGTCTAAAGGGACCAGAGTGGATGCTCAAATTTCTGGGGAATTACTGAATTCGGGTGATTATGCTGTTCTTGGAGGATCTTCTAAAATTGCTGCCATGCTTCTGACGTACCCATTTCAAGTTATTCGAGCTCGATTGCAGCAAAGACCAGGGAATGATGGGATCCCAAGATACATGGATAGCTTCCACGTTCTTAAGGAAACTGCACGGTTTGAGGGCATTCGTGGGTTTTACAGGGGAATTACACCAAACCTTCTAAAGAATGTCCCAGCGGCTTCAATCACATTTATTGTTTGTCGGCGTTTACTTGGAGCTCGTCAGTTATCCATGGTATTGGTGGCAGAAGGAGCTGAGATGGATTCTTTGTGTTTACTAGCAGCCATTTGTTCAACACCATCACAAACAAGTCCAGAGGAGTTATTGTTTTGGGTTCTCTGGTGTTGGTTTTGGTTGAAGAAGAAGCATATTGGAAACAAAGATGGGATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCGTCTGGCTATTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGGACACCCATTATAGTATCAACTGATTCAGAGGTGAATAAGGTTGTTTTACAAAACCATGGGAATATATTTATCCCAGCTTACCCAAAATCAATAACAGAATTACTTGGTACATTTTCAATTCTAAGAATGAATGGAAATGTTCAAAAAAGAGTTCATACAATAATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACAAGATATTCAAAACACTGTTAAACTTCGACTTGCCAATTGGAATTCCTCTCAATTGGTTTATCTCCAAACTGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCTGGCGAAGAATTGAAGATTTTGAAAAGGGAATTTGAAGAGTTTATCAAAGCTTTGATTTGTATACCCATTAAATTACCCGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGCTGTTGAAAATTGTGAGTAAGATTGTGGAAGATCGAAAGTCGAGGGTGGAGGAGAAGGTTGCACCGAGAGATGCGGTGGACGTGCTCTTACAGGATCACGATGAGATTCAAGGGCTACCGTTGGATTTCATCAGCAGTCACATCATAGAGTTGATGATTCCCGGCGAGGAGACGGTGCCGATGGCCATGACCCTCGCCGTCAAGTTTCTCAGTGATTGCCCCCGCGCTCTTGCCCAATTAATGGAAGAGAATATGAAACTGAAGAAGCAGAAGGATGGCTCTGGGGAGGAGTATACGTGGACAGATTACATGTCTCTACTATTTACTCAAAATGTGATCAGTGAAACATTAAGAATGGCCAATATCATCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTGCAAATCAAAGGCTATTTAATACCACAAGGATGGTGTGTCTTGGCGTCTTTTATTTCAGTTCATATGGACGAGAAGAACTACGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGGAAAATTTGTCTGCAACAAACAACCATAACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCTGGCATCGAACTCGCCAGGCTTGAAATCTCGATTTTCCTTCATCATCTCGTCACTACCTACAATGAGGATGAGAAGGAAGCTGCCTATCACAATCACAACCCTAAGCTCTTGATTGGATTCAATCGTCTCAACAACTTCAATACCGAGCTGTCGAAGAAATAA | 2946 | 42.23 | MMDLKMLFFVEILIGCWFGCSFHLLVKLYDSCVYGAWSILFVIPARSVSYDYIALATSSVSFVNYILIPFVSSTNRMLQKIPSFYGNFQVRAAVEDIFHLGWMRTWDCLVSFKTYGAFFIRTFHIFCLDLELYWWMDISWYLPLVFIGKISEGNLPIGKRRVNFPAGKTKKFYASTHLCQPDMWQWENATAGALAGFATVAAMHPLDVVRTRFQVYDGRGSNLPTYKNTANAIFTITRMEGLRGLYAGFYPAVLGSSVSWGLYFFFYGRAKERYSDNGKKDLSPSLHLASAAEAGALVCFCTNPVWLVKTRMQLQGPLHQAQPYSGLYDAFKTILREEGFAALYKGIVPGLMLVSHGAIQFTVYEELRKVIANSRSKGTRVDAQISGELLNSGDYAVLGGSSKIAAMLLTYPFQVIRARLQQRPGNDGIPRYMDSFHVLKETARFEGIRGFYRGITPNLLKNVPAASITFIVCRRLLGARQLSMVLVAEGAEMDSLCLLAAICSTPSQTSPEELLFWVLWCWFWLKKKHIGNKDGIPKGNLGWPFFGETLQFISSGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVVLQNHGNIFIPAYPKSITELLGTFSILRMNGNVQKRVHTIIGAFLRSPQLKAQITQDIQNTVKLRLANWNSSQLVYLQTETKQITFEVLVKVLMSVGPGEELKILKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVSKIVEDRKSRVEEKVAPRDAVDVLLQDHDEIQGLPLDFISSHIIELMIPGEETVPMAMTLAVKFLSDCPRALAQLMEENMKLKKQKDGSGEEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPQGWCVLASFISVHMDEKNYANPHQFDPWRWEENLSATNNHNFTPFGGGQRLCPGIELARLEISIFLHHLVTTYNEDEKEAAYHNHNPKLLIGFNRLNNFNTELSKK | 981 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 33484685 | 33500732 | + | CaPI482276_01g020340.1 | Cam01g2034 | 119116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam01g2034 | 981 | Coils | Coil | 810 | 830 | - | - | |
| Cam01g2034 | 981 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 920 | 929 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam01g2034 | 981 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 282 | 370 | IPR018108 | - | |
| Cam01g2034 | 981 | Gene3D | Cytochrome P450 | 526 | 964 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | Pfam | Cytochrome P450 | 537 | 949 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | Pfam | Mitochondrial carrier protein | 393 | 472 | IPR018108 | - | |
| Cam01g2034 | 981 | Pfam | Mitochondrial carrier protein | 186 | 276 | IPR018108 | - | |
| Cam01g2034 | 981 | Pfam | Mitochondrial carrier protein | 282 | 373 | IPR018108 | - | |
| Cam01g2034 | 981 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 526 | 960 | - | - | |
| Cam01g2034 | 981 | SUPERFAMILY | Mitochondrial carrier | 185 | 472 | IPR023395 | - | |
| Cam01g2034 | 981 | SUPERFAMILY | Cytochrome P450 | 536 | 949 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | CDD | CYP90-like | 568 | 953 | - | - | |
| Cam01g2034 | 981 | FunFam | Folate transporter 1, chloroplastic | 279 | 481 | - | - | |
| Cam01g2034 | 981 | PRINTS | E-class P450 group I signature | 917 | 927 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | E-class P450 group I signature | 927 | 950 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | E-class P450 group I signature | 569 | 588 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | E-class P450 group I signature | 883 | 907 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | E-class P450 group I signature | 776 | 793 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | P450 superfamily signature | 918 | 927 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | P450 superfamily signature | 927 | 938 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | P450 superfamily signature | 844 | 855 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | PRINTS | P450 superfamily signature | 642 | 655 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam01g2034 | 981 | FunFam | folate transporter 1, chloroplastic isoform X1 | 174 | 278 | - | - | |
| Cam01g2034 | 981 | Gene3D | Mitochondrial carrier domain | 224 | 482 | IPR023395 | - | |
| Cam01g2034 | 981 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 183 | 273 | IPR018108 | - | |
| Cam01g2034 | 981 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 185 | 479 | IPR044712 | GO:0006862(InterPro)|GO:0008517(PANTHER)|GO:0009941(PANTHER)|GO:0015230(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro)|GO:1904947(PANTHER) | |
| Cam01g2034 | 981 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 393 | 479 | IPR018108 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g2034 | Cam-Chr1:33484685 | Cam07g1197 | Cam-Chr7:26364090 | 1.30E-114 | dispersed | |
| Cam01g2034 | Cam-Chr1:33484685 | Cam09g0053 | Cam-Chr9:1453267 | 8.70E-138 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam01g2034 | K12637 | - | csv:101203911 | 792.341 |