Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2152 ATGTTGCTGGTTTATTATTTGTGTTTGAGTTTGTTGTTGGGGAAATCGTGGGCAGCTGCAGCCGGCGGTGATGGCACCACGAGGGAGCTCGATCAGACTCCAACGTGGGCTGTTGCTGGTGTTTGTGCTATTATCATCGTTATTTCTATCGCCTTGGAGAAACTCCTTCACAAAGCTGGAACGTGGCTTACGGAAAAGCACAAGAGGGCTCTTTTTGAAGCTCTGGAGAAAGTTAAAGCTGAGCTGATGATTCTGGGTTTCATTTCACTGCTCCTCACCTTCGGACAGAACTATATCATTAAAATTTGCATTCCCACAAAGGTTGCAAATACTATGTTACCATGTGCAGCGGTCAAAGGGGACAAATTGCAAGATGGAGTCGATGAAGGCGAACATCATCGACGGCTTCTATGGTATGAACGCAGGGTCCTGGCTGCTGCTGGTGGCGCTGTTAGTTGCAAGGAAGGTCATGTGCCGCTTATATCTATCTCGGGATTGCATCAGTTGCACTTATTTATCTTCTTCTTAGCCGTATTTCATGTCGTATACAGTGCTATCACAATGATGCTTGGGAGGCTAAAGATTCGAGGTTGGAAGGCATGGGAGGAAGAGACCTCAACTCACAATTATGAGTTCTCAAATGATAATGCACGATTCAGGCTTACTCACGAAACATCGTTTGTGAAAGCCCACACAAGTTTTTGGACAAAACTTCCTGTCTTCTTTTATATTGGATGCTTCTTCCGACAATTTTTCAGGTCCGTTGGTAAGGCTGACTACTTGGCGTTACGTAATGGATTCATCGCCGTTCATCTTGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATAAAAAGGTCTCTAGAAGATGACTTCAAAATAATCGTGGGAGTGAGTCCCCTGCTTTGGGCATCGTTTGTCGTCTTCTTGCTCATAAATGTTTATGGATGGCAAGCATTGTTTTGGACATCCTTAGTCCCTGTGATTATAATCCTGGCTGTTGGAACAAAGCTTCAAGGAATTATGACAAAAATGGCTCTTGAGATTACAGAAAGACATGCTGTTGTGCAAGGAATTCCTCTTGTTCAGGCATCAGATAAATATTTTTGGTTTGGCAAGCCTCAGCTGGTTCTTTACCTCATCCACTTCGCTTTATTTTCGAATGCATTCCAAATAACATACTTCTTCTGGATTTGGTATTCCTTTGGGCTAAAATCCTGCTTCCATACTGATTTCAAGCTAGCAATCGTAAAAGTTGCTCTCGGGGTTGGCGTTCTCTGTCTTTGCAGTTATATTACTCTTCCACTCTATGCTCTTGTGACTCAGATGGGTACGCGTATGAAGAAATCGATCTTTGACGAACAAACATCGAAGGCCCTCAAGAAGTGGCACATGGCTGTTAAGAAGCGACATGGAAAGTCCCCCACTCGAAAGCTAGGGAGTCCAAATGCGTCGCCAATGCATTCATCATCTGGATACACATTGCATCGTTTCAAGACCACAGGTCACTCAAACAGATCGTCCATGTATGACGAAAATGATGCATCTGATTATGAAGTTGATCCGTTGTCGCCTAAAGTTGATACTCCAAATTTTACGGTTAGAATAGACCGCGCCAATGAACATCAAACTGAAATAATTGAATCCCAGCATACAGAAAAAAGGAATGAAGACGATTTCTCATTTGCCAAGCCTGGACCGACGAAAGGACCATGA 1716 43.3 MLLVYYLCLSLLLGKSWAAAAGGDGTTRELDQTPTWAVAGVCAIIIVISIALEKLLHKAGTWLTEKHKRALFEALEKVKAELMILGFISLLLTFGQNYIIKICIPTKVANTMLPCAAVKGDKLQDGVDEGEHHRRLLWYERRVLAAAGGAVSCKEGHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPVFFYIGCFFRQFFRSVGKADYLALRNGFIAVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPLLWASFVVFLLINVYGWQALFWTSLVPVIIILAVGTKLQGIMTKMALEITERHAVVQGIPLVQASDKYFWFGKPQLVLYLIHFALFSNAFQITYFFWIWYSFGLKSCFHTDFKLAIVKVALGVGVLCLCSYITLPLYALVTQMGTRMKKSIFDEQTSKALKKWHMAVKKRHGKSPTRKLGSPNASPMHSSSGYTLHRFKTTGHSNRSSMYDENDASDYEVDPLSPKVDTPNFTVRIDRANEHQTEIIESQHTEKRNEDDFSFAKPGPTKGP 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34286872 34291482 + CaPI482276_01g021520.1 Cam01g2152 119234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2152 571 PANTHER MLO-LIKE PROTEIN 1 24 544 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cam01g2152 571 MobiDBLite consensus disorder prediction 478 511 - -
Cam01g2152 571 MobiDBLite consensus disorder prediction 538 562 - -
Cam01g2152 571 Pfam Mlo family 28 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cam01g2152 571 MobiDBLite consensus disorder prediction 467 571 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2152 Cam-Chr1:34286872 Cam08g1381 Cam-Chr8:20095875 5.20E-175 dispersed
Cam01g2152 Cam-Chr1:34286872 Cam10g0014 Cam-Chr10:1788118 5.10E-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2152 K08472 - csv:101212923 1039.25