Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2281 ATGAAACTTCCTTCCTCATCCTTAATGCCTATCACCAAATCTACCAAACTCTATTTCTTAGCTTCCATTTTGCAATTCAAACCATTGACTCACCCGAAAACAAAACACGGCAATGGGAGATTTTTAGTTCCTTCTAAGTTTCTAACAGATTGGTTTCTCAGAAAAAACTTTGTTGACACATCGAAAAGAAAAAAAAAAACAGAGATGGGAACTCCAGAAAACCTTCTCTTCCTTTGCTTCATCGTCTTATTCATGGTTTCAACCACCGTTTCTCAAATAGAAATCAAAACCCACTTATGTTCAAACAGCGGCAACTACACCAGCAACAGCATTTACAAGCAAAATCTCGACACCCTCCTTTCCACCATCGCCTCCAACACCGAAATTGATTACGGGTTTTACAATTTCTCAGCCGGACAGCAACTCGACAAGGTTAACGCCATCGCCCTTTGCCTGGCCGATCTGACGGTGGAGAAATGCAGGAGCTGTCTCCAAAATTCGACTCGAAGGATTCTAGAGGATTGTCCCAACCAGAAGGAGGCTATCGGATGGTACACCGATTGCATGATTCGTTACTCAAATAGATCAATATTTGGCGTTGGGAACGATCAAGTGCTTAGGCCAACTTTTGTTTCCGGTCGGACTGCATCAGACGTAGTTGGGTACACTCAATCGCTAAGCAGTTTGTTGCAAAGACTGAGAAATCAGGCTGCATCTGGGGATTCTAAACACAAATTCGCAGTGGGTGAAATGCCAGCCCCTAATTTGGATACCATATTTGGGTTTCTTCAATGTACTCCCGATTTGTCCTCTGTGGATTGCAATAATTGTCTCATGAAGGCCGCTGAAAATGTTCCAAATGGAAGTACAGGAACGAGGATATTTTCGACCAGCTGCTTTTTGAGATTTGAGACGAACGATCTTTTCTACAACACTCTGTCGCCGCCTCCCACTGCTGGTGGCGCTCCTTCCCCACCCATGTCGCCGCCGCCGCCTCTGCCTCCAACGCCAGAAAATACGGCTAGAACTGTTACTATCGTTGTGGTGTCTATCGTTTCTGTCATCATTGTTCTCCTTGTTGCCATTTTCATCGTTTTGAGGTTGAGGAAGCGAAATAACAGAAAATCAACAGACAAATTTGAAGGTGTTATTGGGGACACCACTAACGAAATTAGCAGTGTGGAGACCATTCAATTTGATTTTGAAACTATTAAAATTGCAACCAGCGATTTTTCAAGTGAAAACAAGCTGGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAAACTAGCTAACGGACAATGTATAGCAGTGAAGAGACTTGCAAATAATTCACAACAAGGAGATTTTGAATTCAAAAATGAAGTCCTTTTGGTGGTCAAACTTCAACATCGAAACTTGGTTAGGCTGTTGGGATTTTGCTTGCAAAGAACTGAAAGACTTCTCATATATGAGTTCGTACCAAATGCCAGCCTTGACCAATTCATATTTGATTTTGGAAAAAGGACACAATTAGATTGGGAAAGACGATTCAAAATCATAAACGGCATTGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGCCTTCGAATCATACATCGTGATCTCAAAGCTAGCAATATTTTGTTGGATGAGGAAATGAATCCGAAGATTGCAGATTTTGGTATGGCAAGATTGTTTGAAGTAGATGAGACTCAAGGCAATACAAGTAGAATTGTGGGAACTTATGGCTATATGGCTCCAGAGTATTTAATGCATGGCCAATTTTCAGTTAAATCAGATGTCTTTAGTTTTGGTGTTTTAATTCTTGAAATTGTGAGTGGCAAGAAAAATAGTTGCTTTCGCAATGAAGAAAAGATAGAAGATCTCTCCAGCTTTGCATGGAAAAATTGGAAGGCTGGAACGACTAATAATGTCATAGATTCAACACTTAATGTTGGTTCTAGTGTTGAAATGTTAAGATGCATTCACATCGGATTATTGTGTGTTCAAGAGAATGCAGCAGATCGTCCAACGATGGCTACGGTGGTTCTAATGCTTAGTAGCATCTCTCTTACTCTTCCAGTACCTTTGGAACCAGCATTCTTCATGCACACTAACATTGATGAATCCAACACACATTCAAAGAGAAATCAGTGGTTGGAAATGAATGAGACGGCTAGTCATTCTGAAAGCCTACCTCTTCAATCTTTATCCAACGAAGCTTCAATTAGTGAGCTCAACCCCCGCTAG 2235 41.3 MKLPSSSLMPITKSTKLYFLASILQFKPLTHPKTKHGNGRFLVPSKFLTDWFLRKNFVDTSKRKKKTEMGTPENLLFLCFIVLFMVSTTVSQIEIKTHLCSNSGNYTSNSIYKQNLDTLLSTIASNTEIDYGFYNFSAGQQLDKVNAIALCLADLTVEKCRSCLQNSTRRILEDCPNQKEAIGWYTDCMIRYSNRSIFGVGNDQVLRPTFVSGRTASDVVGYTQSLSSLLQRLRNQAASGDSKHKFAVGEMPAPNLDTIFGFLQCTPDLSSVDCNNCLMKAAENVPNGSTGTRIFSTSCFLRFETNDLFYNTLSPPPTAGGAPSPPMSPPPPLPPTPENTARTVTIVVVSIVSVIIVLLVAIFIVLRLRKRNNRKSTDKFEGVIGDTTNEISSVETIQFDFETIKIATSDFSSENKLGQGGFGAVYKGKLANGQCIAVKRLANNSQQGDFEFKNEVLLVVKLQHRNLVRLLGFCLQRTERLLIYEFVPNASLDQFIFDFGKRTQLDWERRFKIINGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGTYGYMAPEYLMHGQFSVKSDVFSFGVLILEIVSGKKNSCFRNEEKIEDLSSFAWKNWKAGTTNNVIDSTLNVGSSVEMLRCIHIGLLCVQENAADRPTMATVVLMLSSISLTLPVPLEPAFFMHTNIDESNTHSKRNQWLEMNETASHSESLPLQSLSNEASISELNPR 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35078857 35081742 + CaPI482276_01g022810.1 Cam01g2281 119363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2281 744 SMART serkin_6 411 685 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2281 744 SUPERFAMILY Protein kinase-like (PK-like) 390 681 IPR011009 -
Cam01g2281 744 MobiDBLite consensus disorder prediction 719 744 - -
Cam01g2281 744 Gene3D - 92 196 IPR038408 -
Cam01g2281 744 Gene3D - 206 307 IPR038408 -
Cam01g2281 744 Gene3D Phosphorylase Kinase; domain 1 385 486 - -
Cam01g2281 744 Pfam Salt stress response/antifungal 100 195 IPR002902 -
Cam01g2281 744 Pfam Salt stress response/antifungal 220 305 IPR002902 -
Cam01g2281 744 FunFam Cysteine-rich receptor-like protein kinase 28 487 689 - -
Cam01g2281 744 MobiDBLite consensus disorder prediction 318 337 - -
Cam01g2281 744 Gene3D Transferase(Phosphotransferase) domain 1 487 688 - -
Cam01g2281 744 FunFam Cysteine-rich receptor-like protein kinase 10 370 486 - -
Cam01g2281 744 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524(InterPro)
Cam01g2281 744 Pfam Protein tyrosine and serine/threonine kinase 414 678 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2281 744 MobiDBLite consensus disorder prediction 314 337 - -
Cam01g2281 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2281 744 ProSiteProfiles Gnk2-homologous domain profile. 204 308 IPR002902 -
Cam01g2281 744 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 186 697 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam01g2281 744 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 93 197 - -
Cam01g2281 744 CDD STKc_IRAK 417 684 - -
Cam01g2281 744 ProSiteProfiles Gnk2-homologous domain profile. 94 197 IPR002902 -
Cam01g2281 744 ProSiteProfiles Protein kinase domain profile. 411 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2078 Cam-Chr1:33849856 Cam01g2281 Cam-Chr1:35078857 5.30E-73 dispersed
Cam01g2278 Cam-Chr1:35062384 Cam01g2281 Cam-Chr1:35078857 1.30E-07 dispersed
Cam01g2281 Cam-Chr1:35078857 Cam01g2285 Cam-Chr1:35110463 5.50E-209 dispersed
Cam01g2280 Cam-Chr1:35071107 Cam01g2281 Cam-Chr1:35078857 1.40E-281 tandem
Cam01g2281 Cam-Chr1:35078857 Cam01g2282 Cam-Chr1:35090791 2.60E-187 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84913 PF07714 PK_Tyr_Ser-Thr 1.10E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2281 - - - 0.0