Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2282 ATGATTTATCCCACCATTTCCCAGCTAGACTTCGCCAAATCTTCATGTCTAAACGCCGGCAACTACACCACCCCCAACAGCACTTACTGGAAAAATCTAGAAACCCTACTTTCCTCCGTGTCCTCCCATCCCCAGTTGATAAGTAACGGCTTCTACAATCTCTCCGCCGGAGAGGAGCCGGACAGAGTGAACGTGGTGGCCCTGTGCATTGGAGATGTTTCGATGGATATATGCAGGGCTTGCGTGGAGGAATCGAGTCGGAATATTTTAGAGGTTTGCCCCAACCAGAAGGCTGCAATCGTGTGGTACGATCAGTGCTTGCTTCGGTACTCGGGGAGTGGAAATTACGATTGGGGGATGGAGTCTATTTTCAACGGCAATAAGGCGTCGTCGGACCCGAATATGTTCGTTGAGGCAGTGAAGAGCTTGATGGGGAGACTAAAGGAAGAGGCTGCTTCAGGGAATTCGACTCAGAAACTGGGGAGCGGGGAGATTTCGGCCGGCAACGAAACTGTGTACGGACTTGTGCAGTGCATTCCGGACATGTCGTCGAGGGATTGCGACAGGTGCATTGGTGAGGGTTTGGTGCTGATCTTTGAGGCTAGGATCGGAGCAAGAATATTTAGTGGTGGTTGTGTTTTGCGATACGAGAACTATATTTTCTTCAATTGGAGGCCCAATGCCTCTTCCTTCTCATCTCCTCTGCCAACTGCAGGAAGCAAAAAAGGCAGAGGCAAAACTACCGCAATCATAGTCATTGTAGTGTCAATTATTTCTACCGTCATTCTTTTTATTGGCATTTACTTCGTTTTGCGGATGAAAAGACGAAAATGCAAAATACCATCGGAAGAAGTTCAAATCAAAGGCATTGCCTGCAAAGAAGCAACAGATGAAATTAGCAATGTGGAGACGATTCAATTTGATTTTGAGACGATCAAAGTAGCAACAAATGAGTTCTCAGATGAAAATAAACTTGGACAAGGTGGATTTGGATCTGTTTACAAGGGAAAGTTGTCTGATGGACAAAACATAGCAGTGAAGAGGCTCTCAAGAGATTCAAATCAAGGAGACTTGGAATTCAAAAATGAAGTCCTTGTAGTGGCCAAGCTTCAACACAGGAACTTAGTTAGGCTGCTAGGGTTCTGCTTTGATGGAAATGAAAGGCTTCTCATCTATGAGTATCTACCAAATGCCAGCCTTGATCAGTTTATCTTCGATCTTATCAAACGCACAATTTTGGATTGGAAAACACGATACAAAATTATAAGTGGCATTGCTCGAGGATTGCTATACCTCCATGAAGATTCCCGTGTTCGAATCATTCATCGAGATCTCAAAGCTAGCAATATTTTGTTGGACGGAAAAATGAATCCTAAAATTGCAGACTTTGGCATGGCAAAATTATTTGAATTAGACGAGACTCAAGGTCAAACCAGGAGAATTGTGGGAACTTATGGTTACATGGCTCCAGAATATGCATACCATGGACAATTCTCACCAAAATCAGATGTGTTTAGTTTTGGAGTTCTAATTCTTGAGATTATAAGTGGCCAGAAAAATGTTTGTTTTTGCGATGAAGAGGAAGACAAAGATCTTTTAAGCTCTGCATGGAAAAATTGGAGAACAGGAAAACCTGAAAATATAATAGATAAGATACTAATATCAAGTTCGAGCGCTGAAATAATAAGATGTATTCATATTGGTCTATTATGTGTTCAAGAAAATGTGGTAGATCGACCAACAATGGCTTCTGTAGTTTTGATGCTCAACAGCTTCTCTCTCCCGCTCTCTCTACCCTCTGAACCTGCCTTTTTGTACAGCAATAATTACTACTCAAATGCACGTAATTCTCAAACTGCTCCTCTTCCAGCTTCAGGAAATGGAGTTTCCGTTTCTGATGTTTATCCTCGTTAG 1914 42.69 MIYPTISQLDFAKSSCLNAGNYTTPNSTYWKNLETLLSSVSSHPQLISNGFYNLSAGEEPDRVNVVALCIGDVSMDICRACVEESSRNILEVCPNQKAAIVWYDQCLLRYSGSGNYDWGMESIFNGNKASSDPNMFVEAVKSLMGRLKEEAASGNSTQKLGSGEISAGNETVYGLVQCIPDMSSRDCDRCIGEGLVLIFEARIGARIFSGGCVLRYENYIFFNWRPNASSFSSPLPTAGSKKGRGKTTAIIVIVVSIISTVILFIGIYFVLRMKRRKCKIPSEEVQIKGIACKEATDEISNVETIQFDFETIKVATNEFSDENKLGQGGFGSVYKGKLSDGQNIAVKRLSRDSNQGDLEFKNEVLVVAKLQHRNLVRLLGFCFDGNERLLIYEYLPNASLDQFIFDLIKRTILDWKTRYKIISGIARGLLYLHEDSRVRIIHRDLKASNILLDGKMNPKIADFGMAKLFELDETQGQTRRIVGTYGYMAPEYAYHGQFSPKSDVFSFGVLILEIISGQKNVCFCDEEEDKDLLSSAWKNWRTGKPENIIDKILISSSSAEIIRCIHIGLLCVQENVVDRPTMASVVLMLNSFSLPLSLPSEPAFLYSNNYYSNARNSQTAPLPASGNGVSVSDVYPR 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35090791 35095095 + CaPI482276_01g022820.1 Cam01g2282 119364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2282 637 MobiDBLite consensus disorder prediction 618 637 - -
Cam01g2282 637 ProSiteProfiles Gnk2-homologous domain profile. 10 115 IPR002902 -
Cam01g2282 637 ProSiteProfiles Gnk2-homologous domain profile. 117 221 IPR002902 -
Cam01g2282 637 SMART serkin_6 319 593 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2282 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2282 637 FunFam Cysteine-rich receptor-like protein kinase 10 282 394 - -
Cam01g2282 637 FunFam Cysteine-rich receptor-like protein kinase 28 395 597 - -
Cam01g2282 637 Gene3D Phosphorylase Kinase; domain 1 283 394 - -
Cam01g2282 637 CDD STKc_IRAK 325 590 - -
Cam01g2282 637 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 135 604 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam01g2282 637 Pfam Protein kinase domain 320 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2282 637 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 9 114 - -
Cam01g2282 637 Gene3D Transferase(Phosphotransferase) domain 1 395 595 - -
Cam01g2282 637 Pfam Salt stress response/antifungal 131 219 IPR002902 -
Cam01g2282 637 Pfam Salt stress response/antifungal 16 111 IPR002902 -
Cam01g2282 637 Gene3D - 9 113 IPR038408 -
Cam01g2282 637 Gene3D - 120 221 IPR038408 -
Cam01g2282 637 ProSiteProfiles Protein kinase domain profile. 319 593 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2282 637 SUPERFAMILY Protein kinase-like (PK-like) 307 617 IPR011009 -
Cam01g2282 637 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2282 Cam-Chr1:35090791 Cam01g2285 Cam-Chr1:35110463 2.40E-173 dispersed
Cam01g2281 Cam-Chr1:35078857 Cam01g2282 Cam-Chr1:35090791 2.60E-187 tandem
Cam01g2282 Cam-Chr1:35090791 Cam01g2283 Cam-Chr1:35099549 4.40E-167 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84914 PF00069 Pkinase 3.10E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2282 - - - 0.0