Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g2285 | ATGGATATGGGCAATTTGAGTTTGAGATCAAGGCATTTGCTCCTCTACTCTGTTATTTCACAATTGATGTTTATTATAACCACAACATCTCAGCCTGACTTCTTTTATTACCTCTGTTCAAACAAAGGCAACTACACCAACAACAGTCCATTCAACAAAAATCTCGACAACGTTCTTGCTTCAATCTCCTCCAATTCTAACACCGACAGCCGTCGGGTCGACTACGGTTTCTATAATGCCACCGCCGGTGAAGATCCCAACACAGCCAACGCTAAGGTTCTTTGTCGTAAGGGCGTTCCGTTGGAACAATGCAGAAGTTGTGTGAATGACTCAGTCCGCAGGATTACACAAAACTGCCCAACCCAGAAGGAAGGTGCAGGATGGTACCACCATTGCCAGATTCTTTACTCAAACAACTCTGTTCACGATGAGACAGATTTGTCCGTGACTCAAATTTATTACAACACCGGTGCAGCCCCAGACAAGAACAGTTTCAATGAGGAACTGAGAGAGTTAATGGATCAACTGCGAGAGGAGGCTGCGTCAGGGACTTCGATTCGAAAGTCTGCAGGCGGAGATGTGAAGCTTAAAAGTCCGAATACGTATACAATATATGGGCTTGTTGATTGTTTTCCCGACATGTCGTACTTCGATTGTGATGTCTGCCTCAATCGGCTTCAAAGTAATCTTCCTTCTTGTTGTAGTGGCAGCATAGGAGCAAGACTGCTTGCAGCTAGTTGTCAAATTAATTATGAAATTCACCCTCTGTATGAATCACTTCTCTCTCCACCTTTGCCGCCTCCGCCGACATCACCATTAGCTCCTAATCTCGCCCCTCCATCTTCTCCGTCAGCACATGGAAATAATGGCAATACTGCTAGAACTGTTATAATTGTCGTGGTATCCATCGTTTCAGCCATTATTTTCTTTGTTGGCGTTTGCTTGATTATGAGATTTAGAAACAGAAAGCAAAAAAGACCATTAAGAAAATTTGAAAATGTTGCTATTGGAGATGCCAGTGATGAAATTAGCAGTACAGAGACAATTCATTTTGATTTTGATGTCGTTAAGGATGCAACTAATGACTTCTCAAGTGAAAACAAGCTAGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAAGCTACCTAATGGACAACATATTGCAGTGAAGAGGCTTGCACATAATTCACAACAAGGAGATGTTGAATTCAAAAATGAAGTACTTTTGGTAGTCAAGCTTCAGCATCGAAACTTGGTTAGACTATTGGGATTCTGCTTGCAAGGAAGCGAAAGACTTCTCATATATGAATTTGTACCAAATGGTAGCCTTGACCATTTCATATTTGATCTTGGGAAGCGGATACAATTAGATTGGGAAAAACGATATAAAATCATAAATGGCACTGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGCCTTCGAATCATTCATCGTGATCTTAAAGCTAGCAATATTTTGTTGGATGAAGAAATGAATCCAAAGATCGCCGATTTTGGTTTAGCAAGATTGTTCGAAGTAGATGAGACTCAAGGCAATACGAGTAGGATTGTGGGAACTTATGGCTATATGGCTCCAGAGTACATAGTACATGGACAATTTTCGGTAAAATCAGATGTCTTTAGCTTTGGTGTTTTGGTTCTTGAAATTGTGAGTGGCCAAAAAAACAATTGTTTTCGCAATGGAGAAAATATTGAAGATCTTACCAGCTTTACTTGGAATAATTGGAGGGCTAGAACAACCACAAATGTCATAGATTCAACACTTGGTGTTGGCTCAAGGATTGAAATGATAAGATGCATTCACATTGGACTATTGTGTGTTCAGGAAAATGTAGCAAACCGACCAACAATGGCTTTGGTGGTTATGATGTTAAGTAGTTCTTCTTTCACTCTCCCTATACCCTCTAAACCTGCATTCTTCATGCATAGCATCACCAATGGATCCAACACAATGTTAGCATCAGATGAGACTAATCATTCTAAAAGCACATCTCTTCAACATTCGGAAAATGCCGACGTTTCAATTACAGAGCTTCACCCTCGTTAA | 2073 | 40.71 | MDMGNLSLRSRHLLLYSVISQLMFIITTTSQPDFFYYLCSNKGNYTNNSPFNKNLDNVLASISSNSNTDSRRVDYGFYNATAGEDPNTANAKVLCRKGVPLEQCRSCVNDSVRRITQNCPTQKEGAGWYHHCQILYSNNSVHDETDLSVTQIYYNTGAAPDKNSFNEELRELMDQLREEAASGTSIRKSAGGDVKLKSPNTYTIYGLVDCFPDMSYFDCDVCLNRLQSNLPSCCSGSIGARLLAASCQINYEIHPLYESLLSPPLPPPPTSPLAPNLAPPSSPSAHGNNGNTARTVIIVVVSIVSAIIFFVGVCLIMRFRNRKQKRPLRKFENVAIGDASDEISSTETIHFDFDVVKDATNDFSSENKLGQGGFGAVYKGKLPNGQHIAVKRLAHNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQGSERLLIYEFVPNGSLDHFIFDLGKRIQLDWEKRYKIINGTARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGLARLFEVDETQGNTSRIVGTYGYMAPEYIVHGQFSVKSDVFSFGVLVLEIVSGQKNNCFRNGENIEDLTSFTWNNWRARTTTNVIDSTLGVGSRIEMIRCIHIGLLCVQENVANRPTMALVVMMLSSSSFTLPIPSKPAFFMHSITNGSNTMLASDETNHSKSTSLQHSENADVSITELHPR | 690 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 35110463 | 35113409 | + | CaPI482276_01g022850.1 | Cam01g2285 | 119367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g2285 | 690 | ProSiteProfiles | Protein kinase domain profile. | 363 | 639 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam01g2285 | 690 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 117 | 649 | - | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cam01g2285 | 690 | ProSiteProfiles | Gnk2-homologous domain profile. | 147 | 256 | IPR002902 | - | |
Cam01g2285 | 690 | SMART | serkin_6 | 363 | 614 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam01g2285 | 690 | Gene3D | Phosphorylase Kinase; domain 1 | 329 | 438 | - | - | |
Cam01g2285 | 690 | MobiDBLite | consensus disorder prediction | 660 | 682 | - | - | |
Cam01g2285 | 690 | Gene3D | Transferase(Phosphotransferase) domain 1 | 439 | 639 | - | - | |
Cam01g2285 | 690 | SUPERFAMILY | Protein kinase-like (PK-like) | 351 | 669 | IPR011009 | - | |
Cam01g2285 | 690 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 439 | 641 | - | - | |
Cam01g2285 | 690 | Gene3D | - | 146 | 255 | IPR038408 | - | |
Cam01g2285 | 690 | Gene3D | - | 31 | 140 | IPR038408 | - | |
Cam01g2285 | 690 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 323 | 438 | - | - | |
Cam01g2285 | 690 | Pfam | Protein tyrosine and serine/threonine kinase | 366 | 627 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g2285 | 690 | MobiDBLite | consensus disorder prediction | 660 | 690 | - | - | |
Cam01g2285 | 690 | Coils | Coil | 162 | 186 | - | - | |
Cam01g2285 | 690 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 484 | 496 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam01g2285 | 690 | CDD | STKc_IRAK | 369 | 633 | - | - | |
Cam01g2285 | 690 | ProSitePatterns | Protein kinases ATP-binding region signature. | 369 | 391 | IPR017441 | GO:0005524(InterPro) | |
Cam01g2285 | 690 | ProSiteProfiles | Gnk2-homologous domain profile. | 33 | 141 | IPR002902 | - | |
Cam01g2285 | 690 | MobiDBLite | consensus disorder prediction | 267 | 287 | - | - | |
Cam01g2285 | 690 | Pfam | Salt stress response/antifungal | 39 | 138 | IPR002902 | - | |
Cam01g2285 | 690 | Pfam | Salt stress response/antifungal | 159 | 252 | IPR002902 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g2281 | Cam-Chr1:35078857 | Cam01g2285 | Cam-Chr1:35110463 | 5.50E-209 | dispersed | |
Cam01g2282 | Cam-Chr1:35090791 | Cam01g2285 | Cam-Chr1:35110463 | 2.40E-173 | dispersed | |
Cam01g2283 | Cam-Chr1:35099549 | Cam01g2285 | Cam-Chr1:35110463 | 1.10E-240 | dispersed | |
Cam01g2285 | Cam-Chr1:35110463 | Cam01g2289 | Cam-Chr1:35129675 | 1.40E-163 | dispersed | |
Cam01g2284 | Cam-Chr1:35104841 | Cam01g2285 | Cam-Chr1:35110463 | 1.40E-243 | tandem | |
Cam01g2285 | Cam-Chr1:35110463 | Cam01g2286 | Cam-Chr1:35117694 | 7.50E-120 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84917 | PF07714 | PK_Tyr_Ser-Thr | 1.20E-47 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g2285 | - | - | - | 0.0 |