Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam01g2286 | ATGATGACTCGATCTTTTCTACTGCAAATAAATGCTGAAAATTACATCGAAACAAGTGGCTCCAAACGGTTTCCTCTGAATAATTGTACAACGAAAGGCACTAGAGATATTTCAATCATCTGTTTTTATCTCTTCAAGAAAAAGTTCGTCTCTTTATCTGCTACCCAAACCAAAATCATGTTCTGTTTCCTCGATTACAGATCTTTGCCAATTTTGTTGCTACTTCTAATTTCAATCCTTGGGCTCAGCCGCTCCCATCATTTTGAACCAAAATATAGGTTCCACATCTGTTCAGCGCCAAGTGATAACACAACCAATTCTAATCAGGGTTCGGACCTCAATGGCCTGCTGAGTTCCCTATCAGAAGCTTCGTCTGACAGCTTCTACAACATAACTTTCAATGGAATATACGGCCTCGTCCTTTGCCGAGGCGATATTAACAGCGATAACTGTCACAGTTGTGTCAGTGCTGCAAGCAAAGAATTAAGGGATCAATGCCCTTTAAGAGTTAACGCCACAATATGGTACGATGAGTGTATGCTGAGATACTCAGACAAGAACTTCTTGGGGACTGTAGAGATATTGCCGAGATTCCTTATGGGCGATTCTGGGAACCAGACATCACCAGATGATCGGAACATTGACGGGCCTGATCTATTGTCTCAGATGGCCAGTGAAGCTGCAGAGCTAGAGATGATGTTCAAGGCAAACAAGTTGGATAACCGTGGGACACGCTATGGATTGGTTCAGTGCACAAGGGATCTCAACAGTAGCGAGTGTTTTACATGTTTGACGGCTCTGCTGGAGGAGATCAAGCAGGTTTACAAAGGGAGAGTGGGGTGGAGAATTTTGGGCCCAAGTTGTAGCATAACGTATGAGCAATATCTTTTCTATCAGCTACCAGCTTCGTGTCAAGGATTAAGCGCGAAAATGATTGTAGCAATCACTATATCAACAGTTGCAGCAGTAGCAATTCTTGCAAGTCTATCGTATTGTTTACTTTTGTCAAAGAAGAGACGACAGGAGATGGACACAGGCGAACAAGTTCTGTTGCGAAATTTGGGAGATGCGAAGTCCGCAGAATTGATGAAGCAAGATTTGCATTCACGAGATAGAGACAATGATGAAGAAATGCATTACTTCAGTTTCACCACTCTACAGGCTGCCACAAACAACTTTGCAGATGCAAATAGACTTGGAGAAGGTGGTTTTGGTCCGGTTTTCAAGGGAAAGTTGATGAATGGGGAAGAAATAGCTGTAAAAAGACTGTCGGTTAAGTCGAGTCAAGGTCACGATGAGTTCAAGAATGAAGTCATGGTCATAATGAAGCTTCAACATAAAAATCTAGTCAGACTTCTGGGATGCTGTCTGGAGGGAGAGGAAAAGCTCCTTGTCTATGAGTACATGGCAAACACTAGTCTAGATGCCTTCCTATTTGATCCAGTTAAATGCAAACAACTCGACTGGCTTAAGCGCAACAACATCATCAATGGAGTTGCAAAAGGAATTCTATATCTACACGAAGACTCTCGGCTCAAAATTATTCATAGGGATTTGAAAGCTAGCAATGTTTTGTTGGATGATGAGATGAATGCAAAGATATCAGACTTTGGAACGGCCAGAATTTTTGGAGGCAAACAAGTTGAGGCTAGCACCAACAGAGTTGTTGGCACTTTTGGATATATGGCACCAGAATATGCAATGGAGGGAGTGTTTTCAATAAAGTCTGATGTTTACAGTTTTGGGATTTTAATGTTAGAAGTGATAAGCGGAAGAAAGAACAGCGGTTTCTTCAAAGTAGACAATGCACAGAGCCTTCTATCACAGGCATGGAAACTATGGAAGGAAGGGAGAGAAGAGGAAATGGTTGATCCGAACCTGGTTGGAGAATGTTCTTTAAGCGAAGCTCTGAGATGGATCCAAATTGGTCTGCTGTGTGTACAAGAAGACCCTAACATCAGACCCACCATGTCAATGGTTGTTCTAATGCTTGGAAGCAAATCGATTCACCTTCCCCAACCGTCGAAACCTCCATTCTTTCCGATTGGATTTCCGATGTCCGCCGATCAATCTTCAATGACTTTACTGGGAACGGGATATCTCTCCACTCAATCGTCTACCACTGCTTCTATCTAG | 2136 | 42.56 | MMTRSFLLQINAENYIETSGSKRFPLNNCTTKGTRDISIICFYLFKKKFVSLSATQTKIMFCFLDYRSLPILLLLLISILGLSRSHHFEPKYRFHICSAPSDNTTNSNQGSDLNGLLSSLSEASSDSFYNITFNGIYGLVLCRGDINSDNCHSCVSAASKELRDQCPLRVNATIWYDECMLRYSDKNFLGTVEILPRFLMGDSGNQTSPDDRNIDGPDLLSQMASEAAELEMMFKANKLDNRGTRYGLVQCTRDLNSSECFTCLTALLEEIKQVYKGRVGWRILGPSCSITYEQYLFYQLPASCQGLSAKMIVAITISTVAAVAILASLSYCLLLSKKRRQEMDTGEQVLLRNLGDAKSAELMKQDLHSRDRDNDEEMHYFSFTTLQAATNNFADANRLGEGGFGPVFKGKLMNGEEIAVKRLSVKSSQGHDEFKNEVMVIMKLQHKNLVRLLGCCLEGEEKLLVYEYMANTSLDAFLFDPVKCKQLDWLKRNNIINGVAKGILYLHEDSRLKIIHRDLKASNVLLDDEMNAKISDFGTARIFGGKQVEASTNRVVGTFGYMAPEYAMEGVFSIKSDVYSFGILMLEVISGRKNSGFFKVDNAQSLLSQAWKLWKEGREEEMVDPNLVGECSLSEALRWIQIGLLCVQEDPNIRPTMSMVVLMLGSKSIHLPQPSKPPFFPIGFPMSADQSSMTLLGTGYLSTQSSTTASI | 711 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 35117694 | 35120882 | - | CaPI482276_01g022860.1 | Cam01g2286 | 119368 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam01g2286 | 711 | Pfam | Protein tyrosine and serine/threonine kinase | 397 | 661 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cam01g2286 | 711 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 514 | 526 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cam01g2286 | 711 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 215 | 680 | - | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
| Cam01g2286 | 711 | ProSiteProfiles | Gnk2-homologous domain profile. | 91 | 188 | IPR002902 | - | |
| Cam01g2286 | 711 | ProSiteProfiles | Protein kinase domain profile. | 393 | 680 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cam01g2286 | 711 | SUPERFAMILY | Protein kinase-like (PK-like) | 375 | 691 | IPR011009 | - | |
| Cam01g2286 | 711 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 357 | 468 | - | - | |
| Cam01g2286 | 711 | CDD | STKc_IRAK | 399 | 664 | - | - | |
| Cam01g2286 | 711 | Gene3D | Transferase(Phosphotransferase) domain 1 | 469 | 671 | - | - | |
| Cam01g2286 | 711 | ProSiteProfiles | Gnk2-homologous domain profile. | 194 | 297 | IPR002902 | - | |
| Cam01g2286 | 711 | SMART | serkin_6 | 393 | 662 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cam01g2286 | 711 | Pfam | Salt stress response/antifungal | 97 | 185 | IPR002902 | - | |
| Cam01g2286 | 711 | Pfam | Salt stress response/antifungal | 218 | 295 | IPR002902 | - | |
| Cam01g2286 | 711 | FunFam | Uncharacterized protein | 469 | 670 | - | - | |
| Cam01g2286 | 711 | Gene3D | - | 199 | 297 | IPR038408 | - | |
| Cam01g2286 | 711 | Gene3D | - | 90 | 188 | IPR038408 | - | |
| Cam01g2286 | 711 | Gene3D | Phosphorylase Kinase; domain 1 | 367 | 468 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g2286 | Cam-Chr1:35117694 | Cam03g0501 | Cam-Chr3:5921619 | 1.80E-132 | dispersed | |
| Cam01g2285 | Cam-Chr1:35110463 | Cam01g2286 | Cam-Chr1:35117694 | 7.50E-120 | tandem | |
| Cam01g2286 | Cam-Chr1:35117694 | Cam01g2287 | Cam-Chr1:35123888 | 6.20E-210 | tandem | |
| Cam01g2286 | Cam-Chr1:35117694 | Cam02g0180 | Cam-Chr2:2758392 | 3.30E-23 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 84918 | PF07714 | PK_Tyr_Ser-Thr | 2.10E-47 | CL0016 | Cam | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam01g2286 | - | - | - | 0.0 |