Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2335 ATGGGTTGTCCAAACTGGAATTTGTTCATGAAGATCTTAATTGGGCTGCTCTTGGTCTTCATCAACCCTTTTTGCTTTGGAGATACTGACCTCCGCGATGTTGCTGCAATCAATGCATTGTTTATTTCTCTTGGCTACCCTCCTTTGCGAGGATGGATTCTTGTGGGAGGTGATCCATGTGGGGAGAAGTGGCAAGGGGTTGAATGTGTATTCTCAAATATAACAGCGATACAACTCAGTGGCTTGAATTTGGGAGGAGAGCTAGGCACTAGCTTGGACCAATTTGAGTCAATAATATCAATGGATCTTAGCAACAATCATATTGGAGGGAATATTCCATCTACATTGCCCGCTACACTGAGAAGTTTTTCGTTATCAGCTAATCAATTCACTGGAAGCATTCCCCCTGCATTTGCCTCGCTAACACAACTAATGGACCTGTCACTAAATAATAACCTTCTTACCGGGGTAATACCTGATGTCTTCCAGCTGCTTAATGGCTTGAATAACTTGGACTTGTCAGGCAACAACTTGAGCGGTCAGCTGCCTCCCTCGATGGCTGATTTGTTCTCCCTTGCTACATTGCACTTGCAGAACAATAAACTTTCTGGGATGCTCGACGCTCTACAGGATCTTCCCTTGTCGGATTTAAAAGATGGGAACCCTTTTAATACTACGATAATTTCGTCTGCACCTGCTTTAGCCCCTTCACCATTTGCTGTTGCGCCAGTTACTGTGGGACAACCAACCAGACAGACAGGTGCAGGTCAGCCATTGTCGTCAGGGACTCCTGGATCGAATGGAGCAAGGACCTTTTTCTCTGTTAAGCGGATAATTTGGATTGTTATTATTGGCACAGCAATATTATTAGCATTGGGATTCTGTCTTCTCGTGTCGATATGTTTGAAAAGAAGCAAGCATCGAGAAGACACCGAGATTCTTCGTGACAACGCTGATATGGCTTCTAAATATAAGCCTAAACCTACAAAGACCTCGGTTGAAGGTGATGACATGGAGAAAGGTCCAAGGGAGACCACTCTTAAGCCACTTGATAGAGACAGAATGAAGGATAGAATAATGGATTTTACCACCTCAAGGCTACATGATGGACAGGACACAAATGGGAAAAGAAAAGATGCCTCTAATACGAGTTTTCGTAAAGACCTTACGGAGAGTTCGAGCATAAGCATAAATGACTTCCCTGCACCACCTCCTCCCCCTCCTTTTCCACTCCTTTCAACTCAGGAGATTGCAAAACCAATAGTGGCAGCTGAAGTGCCCAGTAGAGTACCTAGAAAACTGAACACAAGTTCTTTAAAAGTTTTCACAATTGCGTCACTTCAGCAGTATACTAATAGTTTCTCTGAGGATAATCTTCTGGGGAGAGGCATGCTTGGCAGTGTCTATAGAGCTGAACTTCCAAGTGGGAGGCTTCTGGCTGTTAAGAAACTGGACGGATCCTCTTCAACTAATTGGAGCGATGATGAATTTCACAACCTTGTGTCTAATATATGCCAAATTCGGCACGATAACATTGTGGAGCTTGTGGGATATTGCGCTGAGCATGGACAATATCTACTCATTTATGAGTATTGTAAAAACGGCACGCTCTATGATGCACTCCATGTCGACAAGGAGATGCATCAGAAGCTTTCATGGAATGTACGTGTGAGGATTGCACTTGGAGCTGCACGTGCCCTCGAGTATCTGCATGAAGCCTGTCAACCGCCTACCATGCACCAAAACTTTAAGTCTGCTAACATTCTCTTAGACAATGAGCTAAAACCACAAGTCTCTGACTCTGGCTTAGCTCGGCTGCTTTCTTCAGCTAGTCAGTCGGCTGCACGATTCCTCCCAGCTCATGGTTATAGTGCTCCTGAATTTGAGTTAGGAACTTACACTTACCAAAGTGATATTTTTAGCTTCGGAGTCGTAATGCTAGAGCTTCTCACCGGTCGGAAGTCCTGTGACCGATCACTGCCTCGAGGAGAGCAATTTCTTGTTCGATGGGCTGTTCCAAGGCTGCATGATATTGATGCATTATCAAGAATGGTCGATCCATCTCTTAATGGCATGTATCCTGTTAAGTCGTTATCGCGCTTTGCTGATATTATTTCCTCCTGTATAATGGTCAAGTTATTGGTTGTGTTCTCCGGAGATGGCGCCTTTATTCCAAATGTAAAAACTTTGGAAGACGTCATTACATTATTGAGCATCATTGAAACAACATATCAGCCTCGTGTATTGGCTGAAGATTTATTTTGGACACATCCTTTTACAAATGTTAGCGACCTCCCATCCTTGAATTTAATTGTTCAACCTCCGCTACAACAATTTGTGTATCGGATAACGACAGATGCTGCATATTGA 2370 43.71 MGCPNWNLFMKILIGLLLVFINPFCFGDTDLRDVAAINALFISLGYPPLRGWILVGGDPCGEKWQGVECVFSNITAIQLSGLNLGGELGTSLDQFESIISMDLSNNHIGGNIPSTLPATLRSFSLSANQFTGSIPPAFASLTQLMDLSLNNNLLTGVIPDVFQLLNGLNNLDLSGNNLSGQLPPSMADLFSLATLHLQNNKLSGMLDALQDLPLSDLKDGNPFNTTIISSAPALAPSPFAVAPVTVGQPTRQTGAGQPLSSGTPGSNGARTFFSVKRIIWIVIIGTAILLALGFCLLVSICLKRSKHREDTEILRDNADMASKYKPKPTKTSVEGDDMEKGPRETTLKPLDRDRMKDRIMDFTTSRLHDGQDTNGKRKDASNTSFRKDLTESSSISINDFPAPPPPPPFPLLSTQEIAKPIVAAEVPSRVPRKLNTSSLKVFTIASLQQYTNSFSEDNLLGRGMLGSVYRAELPSGRLLAVKKLDGSSSTNWSDDEFHNLVSNICQIRHDNIVELVGYCAEHGQYLLIYEYCKNGTLYDALHVDKEMHQKLSWNVRVRIALGAARALEYLHEACQPPTMHQNFKSANILLDNELKPQVSDSGLARLLSSASQSAARFLPAHGYSAPEFELGTYTYQSDIFSFGVVMLELLTGRKSCDRSLPRGEQFLVRWAVPRLHDIDALSRMVDPSLNGMYPVKSLSRFADIISSCIMVKLLVVFSGDGAFIPNVKTLEDVITLLSIIETTYQPRVLAEDLFWTHPFTNVSDLPSLNLIVQPPLQQFVYRITTDAAY 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35453964 35461196 - CaPI482276_01g023350.1 Cam01g2335 119417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2335 789 ProSiteProfiles Protein kinase domain profile. 454 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2335 789 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515(InterPro)
Cam01g2335 789 Gene3D Transferase(Phosphotransferase) domain 1 532 712 - -
Cam01g2335 789 SUPERFAMILY Protein kinase-like (PK-like) 431 711 IPR011009 -
Cam01g2335 789 SMART serkin_6 454 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2335 789 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 532 713 - -
Cam01g2335 789 Gene3D Phosphorylase Kinase; domain 1 421 531 - -
Cam01g2335 789 Pfam Leucine Rich Repeat 98 116 IPR001611 GO:0005515(InterPro)
Cam01g2335 789 MobiDBLite consensus disorder prediction 319 407 - -
Cam01g2335 789 Gene3D Ribonuclease Inhibitor 39 234 IPR032675 -
Cam01g2335 789 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 232 - -
Cam01g2335 789 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 709 IPR046959 -
Cam01g2335 789 Pfam Protein tyrosine and serine/threonine kinase 458 654 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2335 789 SUPERFAMILY L domain-like 35 216 - -
Cam01g2335 789 MobiDBLite consensus disorder prediction 319 385 - -
Cam01g2335 789 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 423 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2330 Cam-Chr1:35405567 Cam01g2335 Cam-Chr1:35453964 3.90E-15 dispersed
Cam01g2335 Cam-Chr1:35453964 Cam07g1140 Cam-Chr7:25833262 1.00E-96 dispersed
Cam01g2334 Cam-Chr1:35446589 Cam01g2335 Cam-Chr1:35453964 3.10E-36 tandem
Cam01g2335 Cam-Chr1:35453964 Cam02g0136 Cam-Chr2:2464377 5.00E-136 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84922 PF07714 PK_Tyr_Ser-Thr 1.20E-33 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2335 - - - 0.0