Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2365 ATGGACGAAGAGGCTAATTCTTGGCTTAGGAGAACGAAGTTTTCTCACACAGTTTATCATCGATGGGACTCATTAAGATTAAACCCAGTTCCTTTCATCGTCGAACCATCTCGTAATTCTGGCTTGAAATCGAGGCCTACATCAGCTTCCTCCACTCAGAAACCAAATCCTGATATTTTGAAGATTCAGCGAAGCTTCATATCCAATAAACAGAGGTCTCTGTCTCCTCTTCCCGAGAGCAATCTCTCTGAAGTTTTCAAGGAAGCGAAATCCGACAGTAAGAGATTCTCAACTCCAACTCCTCGACTTAGAGAACGAACTAAGGAATTCAAGAACAAGCTATTCAATAAGGACCCTCAAGATTCAAAATCGGCCGATTCCAAGTCATCGTCTAATACCAGTCCCCTGAAACTCCTATCTTCGGGGAAAGGGGGTGATAAGTCAAAGTTCCGGAAAGATTCTTCCTGGACCAAATACTTCGATTCCGGTGGAGGAAAAGTCACCGCGGTCGAAACAGCCGAAGACTGGACTGTTGATCTCTCCAAGTTGTTTGTTGGGTTAAGGTTTGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAATGATGAACCTGTTGCTGTTAAAATTATTAGGGTGCCCGAGGATGACGAAAATGGAACGCTTGCTTCTCGATTGGAGAAACAATTTACCAGAGAAGTTACCCTTTTATCTCGTCTCCATCATCCGAATGTTATAAAGTTTGTAGCTGCGAGTAGGAACCCACCTGTATACTGTGTCATTACTGAATATTTGTCCCAAGGATCATTACGGGCATACTTACACAAACTTGAGCACCAATCCCTCCCTTTGCAAAAACTAATTGAATTTGCTTTAGATGTCGCTCGTGGCATGGAATACCTTCACTCACAAGGCGTAATTCATCGGGATCTTAAGCCTGAGAATGTTCTTATTGATGAAGACTTCCACTTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGAGGCCTTTTTTGACCCATTAGCTGATGATCCCGGAACTTATCGGTGGATGGCACCGGAGATGATCAAACATAAACCTTGTAGTCGAAAGGTAGATGTGTACAGCTTTGGGCTTATGTTGTGGGAAATGGTGTCTGGTGCAATTCCATACGAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAATAAGAATCTTAGGCCTGTTATTTCAAGTGATTGTCCATTGGCAATGCGGGCTTTAATCGAGCAATGTTGGTCCCTACAACCGGACAAGAGACCCGATTTCTGGCAGATTGTGAAGGTACTAGAGCAATTCGAATCTTCGCTTGCCCGTGATGGGACACTGAATTTATTAGGTAACCCTCTGTCTAGTTTCCAAGACCATAAGAAAGGGCTTCTTCATTGGATTCAAAAGCTTGGCCCCCTGCATCCTGAAACCTCGCCCTCTCCCGTGCCGAAACCGAAATTCTCGCCTGTTACAGGGGGGGTGGTTGAGTCCAGTCAAGGGAAAAGAGAAGTGTTGAAGCAATGGGGGGTTATGAGGTTAGACGAAGGCTGCTTTCATGCATAA 1581 44.34 MDEEANSWLRRTKFSHTVYHRWDSLRLNPVPFIVEPSRNSGLKSRPTSASSTQKPNPDILKIQRSFISNKQRSLSPLPESNLSEVFKEAKSDSKRFSTPTPRLRERTKEFKNKLFNKDPQDSKSADSKSSSNTSPLKLLSSGKGGDKSKFRKDSSWTKYFDSGGGKVTAVETAEDWTVDLSKLFVGLRFAHGAHSRLYHGKYNDEPVAVKIIRVPEDDENGTLASRLEKQFTREVTLLSRLHHPNVIKFVAASRNPPVYCVITEYLSQGSLRAYLHKLEHQSLPLQKLIEFALDVARGMEYLHSQGVIHRDLKPENVLIDEDFHLKIADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPCSRKVDVYSFGLMLWEMVSGAIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSLQPDKRPDFWQIVKVLEQFESSLARDGTLNLLGNPLSSFQDHKKGLLHWIQKLGPLHPETSPSPVPKPKFSPVTGGVVESSQGKREVLKQWGVMRLDEGCFHA 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35676938 35680289 - CaPI482276_01g023650.1 Cam01g2365 119447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2365 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 MobiDBLite consensus disorder prediction 125 139 - -
Cam01g2365 526 MobiDBLite consensus disorder prediction 40 60 - -
Cam01g2365 526 Pfam Protein tyrosine and serine/threonine kinase 190 439 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 FunFam serine/threonine-protein kinase HT1 268 457 - -
Cam01g2365 526 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 PRINTS Tyrosine kinase catalytic domain signature 347 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 PRINTS Tyrosine kinase catalytic domain signature 410 432 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 MobiDBLite consensus disorder prediction 481 500 - -
Cam01g2365 526 CDD STKc_MAP3K-like 190 439 - -
Cam01g2365 526 MobiDBLite consensus disorder prediction 86 124 - -
Cam01g2365 526 Gene3D Phosphorylase Kinase; domain 1 171 267 - -
Cam01g2365 526 SMART serkin_6 183 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 SUPERFAMILY Protein kinase-like (PK-like) 168 439 IPR011009 -
Cam01g2365 526 Gene3D Transferase(Phosphotransferase) domain 1 268 458 - -
Cam01g2365 526 ProSiteProfiles Protein kinase domain profile. 183 443 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam01g2365 526 PANTHER SERINE-THREONINE PROTEIN KINASE 94 441 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cam01g2365 526 MobiDBLite consensus disorder prediction 86 151 - -
Cam01g2365 526 FunFam Kinase suppressor of Ras 1 172 266 - -
Cam01g2365 526 MobiDBLite consensus disorder prediction 37 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2212 Cam-Chr1:34632598 Cam01g2365 Cam-Chr1:35676938 9.70E-90 dispersed
Cam01g2365 Cam-Chr1:35676938 Cam11g1142 Cam-Chr11:22404977 8.40E-79 dispersed
Cam01g2365 Cam-Chr1:35676938 Cam03g0618 Cam-Chr3:7039496 6.20E-167 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84923 PF07714 PK_Tyr_Ser-Thr 3.60E-60 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2365 - - - 0.0