Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2375 ATGGCTCTGAATCTCAGACTCCATACACTCATATTCCTTCTCCTTCTCTTCTCCTTCTGTACTCCATCATTTTCAGATTCAATTCCATCTCCCAATTCCCAATGCGAAGCTCAGCTGCAACAAGGCTGCCATGACAGAGCCGAGGCCCTCAAACTCAAGCTCATCGCCATCGCTTCCATTTTAGTCGCGAGCATGATCGGCGTTTGTCTTCCCCTCTTCTCCCGCGCCGTGCCGGTGCTTCAACCAGAGAGAAAGCCCTTCGCAATCGTTAAGGCATTTGCCTCCGGTGTGATTCTAGCCACTGGATATATGCACGTTCTCCCCGATTCCTTCGATTGCTTGACATCCCCCTGTTTGCCAGAGAATCCATGGCGGAAATTCCCTTTCTCAACATTCATAGCAATGCTTTCCGCTGTTATGACTCTAATGTTGGACTCGTTTTCAATGAGTCGCTACAATAAAAAGTTGATGCAGGATCAAGAAGCCGCAGACGAGGAGGAGAAGAACGAGGATCGCAAGGAAATCAGTGACAATTTTGGGAAAGAAGAAGGAATAATCGAGAAAAAACTTGGTTCGCAATTGCTACGGTACCGTGTTGTTGCTCAGTTATTAGAAGCGGGGATCGTTGTGCATTCGGTGGTGATAGGGCTTTCAATGGGGGCTTCAGATAATCCGTGTACCATAAGACCGCTCATCGCTGCTCTGTGCTTTCATCAGCTGTTTGAAGGGATGGGGCTTGGAGGGTGCATTTTGCAGGCGGAATATAGGTTGAAGATGAAGGCGATAATGGTGTTTTTCTTCTCGGTTACAACGCCGTTTGGAATAGCATTGGGAATTGGGTTGTCGAATGTGTACAGTGAGAACAGTCCCACGGCTCTTATAGTTGTGGGAATTTTGAATGCTTTATCTGCTGGGTTGTTGAATTATATGGCATTGGTTGATTTGTTGGCGCATGATTTCATGGGGCCTAAATTGCAAGCCAATATCAAGCTGCAAATATGGGCTTATGTTGCTGTTTTGTTGGGCGTTGGTGGCATGTCATTGATGGCAAAATGGGCTTAG 1062 46.89 MALNLRLHTLIFLLLLFSFCTPSFSDSIPSPNSQCEAQLQQGCHDRAEALKLKLIAIASILVASMIGVCLPLFSRAVPVLQPERKPFAIVKAFASGVILATGYMHVLPDSFDCLTSPCLPENPWRKFPFSTFIAMLSAVMTLMLDSFSMSRYNKKLMQDQEAADEEEKNEDRKEISDNFGKEEGIIEKKLGSQLLRYRVVAQLLEAGIVVHSVVIGLSMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQAEYRLKMKAIMVFFFSVTTPFGIALGIGLSNVYSENSPTALIVVGILNALSAGLLNYMALVDLLAHDFMGPKLQANIKLQIWAYVAVLLGVGGMSLMAKWA 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35746170 35747231 - CaPI482276_01g023750.1 Cam01g2375 119457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2375 353 PANTHER ZINC/IRON TRANSPORTER 47 352 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cam01g2375 353 NCBIfam ZIP zinc/iron transport family 35 353 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cam01g2375 353 Coils Coil 149 169 - -
Cam01g2375 353 Pfam ZIP Zinc transporter 50 350 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0933 Cam-Chr1:11447917 Cam01g2375 Cam-Chr1:35746170 5.70E-108 dispersed
Cam01g2375 Cam-Chr1:35746170 Cam11g1710 Cam-Chr11:29785393 3.30E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2375 K14709 - csv:101204028 558.91