Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2397 ATGGTACTCCCGTTATTGAAGCTCGGAACCCTGGCGTTGAAAACTCTGAGCAAGCCGCTCGGTAATAGGCTCAAGAAACAAGCTGCGTTGCACCCCAGATTTAGGCAGTTCATCATTAATGTGGCCCAGATTAACCATCGGATGTCAACGCAAATGCAAAGACGCATATACAGTCATGCAACTGATGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTCTTCTCGGTAGCCGGAGCAATAGTGATATTTGAGGTTCAAAGAAGTGCTAGGTCAGAAGCCAGAAAAGAAGAACTACGCAGACAAGAAATGGAGGCACTGAGGCAAAGGGACGAAAGCTTATCGACAGAAATGGAACTTTTGAAGCTTAAACTTGTAGAATTGGAACAACAAGCCAAAGGACGAGGTCTTGGTGGTGTCCTTGCACTTTCTTGCTCCATATTGTGGGAGGTCCAAGCCCTGTTCAGAACTAGGGCTTGCCATTCACCTGCTACCCATTTTCCTGCGAGTTCCTCGGGGCTAGGAGAAAAGTTTGAGTTTTGTAATGGGAAAGCATTCAAAGACCAGTTGCAATATGCAAGGAAAGAGAGCCGCACGGTTGATGTGACAGTTCTCGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAAGCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTCTTGGGTCATTTTCATCAGACATTTGTCGATTGTTGCAACTTTGCGAGGAGGATGATGATGCGTCTAGTCCATTAGCTGCTCCTAAGCCCGAACCTAATGAACAAAATTTGCAGGTTGGAGATACTATGGCACTGCAAGAGGGATATAATGTGAATCATGGACACCAAGAACCAAGCTTTCCTCTGGTTGATCAATGCAAGAACTCCCCTTCAGGAGTTCATGGTATGGCTATGAATAACTTGGAAGGACCTACACAATTGGAGTGTCATCAGTTTGATTTACATCAAGGCATTGAGCACAATTTCTACTCTATTCTTAATGGTAGAGGATTATGTGGGGAGGGTGCAATTCCTCATGTTTCTAGCTACTGTCCCAGCATTTGCCCTCCACCTGCTGCTTTTTTGGGCCCAAAATGTGCGCTTTGGGATTGCCCACGACCTGCCCAAGGGATGGATTGGTGTGAGGACTACTGTAGCAGCTTTCATGCTGCCTTAGCATTGAATGAAGGCCCTCCTGGAATGGGTCCAGTTTTAAGACCTGGTGGAATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGGAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAGCTTTTTGATCTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGAAAGCAGAGGTCACTGCCTGATTACAGTGGACGTGGTTGGCACGAGTCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAATAAGTATGATGCCTGCGCTTTGTATAGATTGGAGCTGAAACTTGTCGATGGGAAAAAAGGTTCTAAGGCAAAGGTATCTAATGATTCAGTTGCTGATTTACAGAGGCAAATGGGGAGATTGACCGCCGAATTTCCTGATAATAAACGCTTTGTTAAGGGGAGGACCAGAATTAACACAAAAGTTGGTCTTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCGCCCAATGGAACATATGACTATATGCTTCATGCACAATATGATTACCTTGTGGAGAATTTGAGTGAATATTACCTTACATAG 1953 45.26 MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQINHRMSTQMQRRIYSHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEELRRQEMEALRQRDESLSTEMELLKLKLVELEQQAKGRGLGGVLALSCSILWEVQALFRTRACHSPATHFPASSSGLGEKFEFCNGKAFKDQLQYARKESRTVDVTVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDTMALQEGYNVNHGHQEPSFPLVDQCKNSPSGVHGMAMNNLEGPTQLECHQFDLHQGIEHNFYSILNGRGLCGEGAIPHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGMDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKVSNDSVADLQRQMGRLTAEFPDNKRFVKGRTRINTKVGLGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35920066 35930067 + CaPI482276_01g023970.1 Cam01g2397 119479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2397 650 Pfam Optic atrophy 3 protein (OPA3) 6 126 IPR010754 -
Cam01g2397 650 PANTHER TRANSCRIPTION FACTOR VOZ1 201 648 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(PANTHER)|GO:0048578(InterPro)
Cam01g2397 650 Coils Coil 101 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2397 Cam-Chr1:35920066 Cam02g1060 Cam-Chr2:16881002 1.20E-132 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51371 PF07047 OPA3 2.00E-41 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2397 - - - 0.0