Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam01g2492 | ATGTCAGATGAAATGTTTAAAGATCTTTTTTATGGCGGGATGGATGAGTACGAGTCTCTAGTGAGAGCTTTTGGGGAATCATCGGATTATTCGAATAATAATAATGAAATTTCGGGGACTCCCATAAATTCTTGTGGATCTTTGTCGTCTTCGGATGCTGGAGCTGAGGAGGATGATTCTGTGAAAGAGAAGGATAAGCAGATCGACAAAGAACATGTTGAAGATGGAGGAGAGAGTTCTAAGGCTGGATCAGGTAAATCAAAGAAGAAAGGAGAGAAGAAAGAGAGAGAAGCGAGAGTTGCTTTCATGACGAAGAGCGAGGTTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAGGCTGTTAAGAACAGTGCTTATCCTAGGAGCTATTACAGATGTACAACTCAAAAATGCGGAGTGAAAAAACGAGTAGAGAGATCCTTTGAAGATCCATCCATTGTAATTACAACCTATGAAGGTCAACACAACCACCCAGTCCCGACAACGCTAAGAGGAAACCTATCAGCGGCGAGCAGCACGTTCTCACCATCCATGCTAGCACCAATGCCAGTGGTCGGTGGTATTGGGTTTCTACCTACAGAGTTGTTGAGTAATTCTTCCAACAACAATAACCAGGCCATCAATGGTGGCGCATCCGTTTATTCACATAACAACTTTGACTACACTTATAATGAGCGACAATCAGAATATGGGCTTCTACAGGATATTTTTCCAACTCCTTCATCGTTCTTCAACCGGCAATTGTGA | 780 | 42.18 | MSDEMFKDLFYGGMDEYESLVRAFGESSDYSNNNNEISGTPINSCGSLSSSDAGAEEDDSVKEKDKQIDKEHVEDGGESSKAGSGKSKKKGEKKEREARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSFEDPSIVITTYEGQHNHPVPTTLRGNLSAASSTFSPSMLAPMPVVGGIGFLPTELLSNSSNNNNQAINGGASVYSHNNFDYTYNERQSEYGLLQDIFPTPSSFFNRQL | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 36615537 | 36617074 | + | CaPI482276_01g024920.1 | Cam01g2492 | 119574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam01g2492 | 259 | FunFam | WRKY transcription factor 57 | 97 | 171 | - | - | |
Cam01g2492 | 259 | SMART | WRKY_cls | 111 | 170 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam01g2492 | 259 | MobiDBLite | consensus disorder prediction | 27 | 98 | - | - | |
Cam01g2492 | 259 | Pfam | WRKY DNA -binding domain | 112 | 169 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam01g2492 | 259 | Gene3D | WRKY domain | 95 | 172 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam01g2492 | 259 | ProSiteProfiles | WRKY domain profile. | 106 | 171 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam01g2492 | 259 | SUPERFAMILY | WRKY DNA-binding domain | 103 | 171 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam01g2492 | 259 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 55 | 211 | IPR044810 | GO:0003700(InterPro) | |
Cam01g2492 | 259 | MobiDBLite | consensus disorder prediction | 27 | 54 | - | - | |
Cam01g2492 | 259 | MobiDBLite | consensus disorder prediction | 55 | 98 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g2492 | Cam-Chr1:36615537 | Cam09g2282 | Cam-Chr9:37291313 | 1.80E-42 | dispersed | |
Cam10g1124 | Cam-Chr10:24329911 | Cam01g2492 | Cam-Chr1:36615537 | 3.80E-14 | dispersed | |
Cam01g2492 | Cam-Chr1:36615537 | Cam02g1905 | Cam-Chr2:32116765 | 2.80E-35 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51381 | PF03106 | WRKY | 8.00E-26 | CL0274 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam01g2492 | - | - | - | 0.0 |