Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam01g2495 ATGATTTCCCTGGATAAGGACCCTTCTCCCAAATCCAAGTATATTATGCTCATCATTCCTCTTCGTCAAATTCATCCACCAGCCTCTTCACTTCATTTCATACCCATTTCAAATTCTTTCTGGATCATTCCAATGGCTGCCTCTACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGGCCGTGAAACTGTCCCCCAACGCCCCTGAAATTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACGGCCAGCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACTTGACCGGAGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCTGAGCTTTTGTCCCGCAATGGTGTGAAGTTTGGTGAGGCTGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGGCTTGACTACTTGGGAAACCCCAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACTCAGGTTGTGTTGATGGGCGCCGTCGAGGGCTACCGTATTGCCGGCGGCCCGCTCGGGGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAAGGTCCATTGGAGAATTTGGCTGACCACCTTTCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACAAACTTTGTTCCCGGAAAGTGA 930 53.76 MISLDKDPSPKSKYIMLIIPLRQIHPPASSLHFIPISNSFWIIPMAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 36643198 36644127 + CaPI482276_01g024950.1 Cam01g2495 119577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam01g2495 309 MobiDBLite consensus disorder prediction 69 90 - -
Cam01g2495 309 FunFam Chlorophyll a-b binding protein, chloroplastic 100 302 - -
Cam01g2495 309 SUPERFAMILY Chlorophyll a-b binding protein 92 306 - -
Cam01g2495 309 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 48 309 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cam01g2495 309 Gene3D Chlorophyll a/b binding protein domain 100 302 - -
Cam01g2495 309 Pfam Chlorophyll A-B binding protein 109 276 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2495 Cam-Chr1:36643198 Cam03g0750 Cam-Chr3:8378243 1.20E-149 dispersed
Cam01g2494 Cam-Chr1:36640626 Cam01g2495 Cam-Chr1:36643198 7.50E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam01g2495 K08912 - csv:101221671 527.709